Quantitative structure-property relationship study of n-octanol-water partition coefficients of some of diverse drugs using multiple linear regression

被引:70
作者
Ghasemi, Jahanbakhsh [1 ]
Saaidpour, Saadi [1 ]
机构
[1] Razi Univ, Fac Sci, Dept Chem, Kermanshah, Iran
关键词
n-Octanol-water partition coefficients; quantitative structure-property relationship; genetic algorithm (GA); multiple linear regression; prediction;
D O I
10.1016/j.aca.2007.10.004
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
A quantitative structure-property relationship (QSPR) study was performed to develop models those relate the structures of 150 drug organic compounds to their n-octanol-water partition coefficients (logP(o/w)). Molecular descriptors derived solely from 3D structures of the molecular drugs. A genetic algorithm was also applied as a variable selection tool in QSPR analysis. The models were constructed using 110 molecules as training set, an [ predictive ability tested using 40 compounds. modeling of logP(o/w) of these compounds as a function of the theoretically derived descriptors was established by multiple linear regression (MLR). Four descriptors for these compounds molecular volume (MV) (geometrical), hydrophilic-lipophilic balance (HLB) (constitutional), hydrogen bond forming ability (HB) (electronic) and polar surface area (PSA) (electrostatic) are taken as inputs for the model. The use of descriptors calculated only from molecular structure eliminates the need for experimental determination of properties for use in the correlation and allows for the estimation of logP(o/w) for molecules not yet synthesized. Application of the developed model to a testing set of 40 drug organic compounds demonstrates that the model is reliable with good predictive accuracy and simple formulation. The prediction results are in good agreement with the experimental value. The root mean square error of prediction (RMSEP) and square correlation coefficient (R-2) for MLR model were 0.22 and 0.99 for the prediction set logP(o/w) (c) 2007 Elsevier B.V. All rights reserved.
引用
收藏
页码:99 / 106
页数:8
相关论文
共 45 条
[1]  
[Anonymous], 1989, MULTIVARIATE CALIBRA
[2]  
Avdeef A., 2003, ABSORPTION DRUG DEV, DOI [10.1002/047145026X, DOI 10.1002/047145026X]
[3]   A comparative study of topological and geometrical parameters in estimating normal boiling point and octanol/water partition coefficient [J].
Basak, SC ;
Gute, BD ;
Grunwald, GD .
JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES, 1996, 36 (06) :1054-1060
[4]   A NEW METHOD FOR THE ESTIMATION OF PARTITION-COEFFICIENT [J].
BODOR, N ;
GABANYI, Z ;
WONG, CK .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1989, 111 (11) :3783-3786
[5]  
*CAMBRIDGESOFT COR, 2005, CHEMOFFICE
[6]  
DEBNATH AK, 2001, COMBINATORIAL LIB DE
[7]   THE DEVELOPMENT AND USE OF QUANTUM-MECHANICAL MOLECULAR-MODELS .76. AM1 - A NEW GENERAL-PURPOSE QUANTUM-MECHANICAL MOLECULAR-MODEL [J].
DEWAR, MJS ;
ZOEBISCH, EG ;
HEALY, EF ;
STEWART, JJP .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1985, 107 (13) :3902-3909
[8]   Modeling lipophilicity from the distribution of electrostatic potential on a molecular surface [J].
Du, QH ;
Arteca, GA .
JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN, 1996, 10 (02) :133-144
[9]   Toward a principled methodology for neural network design and performance evaluation in QSAR. Application to the prediction of LogP [J].
Duprat, AF ;
Huynh, T ;
Dreyfus, G .
JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES, 1998, 38 (04) :586-594
[10]  
ELTAYAR N, 1991, J PHARM SCI, V80, P590