A wrapper-based feature selection approach to investigate potential biomarkers for early detection of breast cancer

被引:17
|
作者
Alnowami, Majdi R. [1 ]
Abolaban, Fouad A. [1 ]
Taha, Eslam [2 ]
机构
[1] King Abdulaziz Univ, Dept Nucl Engn, Fac Engn, POB 80204, Jeddah 21589, Saudi Arabia
[2] King Abdulaziz Univ, Ctr Training & Radiat Prevent, POB 80204, Jeddah 21589, Saudi Arabia
关键词
Breast cancer; Biomarkers; Feature ranking; Classification; LEPTIN; SYSTEM;
D O I
10.1016/j.jrras.2022.01.003
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Breast cancer (BC) biomarkers can radically improve the early detection in patients and, as a result, reduce mortality rate, whether for detecting individuals at increased risk of developing cancer or in the screening process. Finding a successful biomarker for breast cancer would be a fast and low-cost first solution to predicting BC, and it could potentially lead to a decline in the global BC mortality rate. However, biomarker exploration translates into the role of feature ranking and selection in machine learning terminology. This study explores the influence of using a particular biomarker or combinations of different biomarkers as predictors for breast cancer. Three different classification algorithms were integrated with a sequential backward selection model: support vector machine (SVM), random forests (RF), and Decision Trees (DTs). The result shows that the optimal set of biomarkers comprises Glucose, Resistin, homo, BMI, and Age using the SVM model. The sensitivity and specificity were 0.94 and 0.90, respectively and the 95% confidence interval for the AUC was [0.89, 0.98]. The result indicates that Glucose, Resistin, homo, BMI, and Age combined can serve as a crucial BC biomarker in BC screening and detection.
引用
收藏
页码:104 / 110
页数:7
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