The application of tetracycline-regulated gene expression systems in the validation of novel drug targets in Mycobacterium tuberculosis

被引:37
作者
Evans, Joanna C. [1 ,2 ,3 ]
Mizrahi, Valerie [1 ,2 ,3 ]
机构
[1] Univ Cape Town, Mol Mycobacteriol Res Unit, Natl Hlth Lab Serv, South African Med Res Council, Anzio Rd, ZA-7925 Cape Town, South Africa
[2] Univ Cape Town, Inst Infect Dis & Mol Med, DST NRF Ctr Excellence Biomed TB Res, Cape Town, South Africa
[3] Univ Cape Town, Fac Hlth Sci, Div Med Microbiol, Cape Town, South Africa
基金
新加坡国家研究基金会; 英国医学研究理事会;
关键词
Mycobacterium tuberculosis; drug discovery; regulated gene expression; hypomorphs; target validation; target-based whole cell screening; RESISTANT PULMONARY TUBERCULOSIS; INDUCIBLE PROTEIN-DEGRADATION; COENZYME-A BIOSYNTHESIS; PANTOTHENATE SYNTHETASE; CONDITIONAL EXPRESSION; TET REPRESSOR; IN-VITRO; BIOCHEMICAL-CHARACTERIZATION; ANTIBACTERIAL DISCOVERY; REACTION INTERMEDIATE;
D O I
10.3389/fmicb.2015.00812
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Although efforts to identify novel therapies for the treatment of tuberculosis have led to the identification of several promising drug candidates, the identification of high quality hits from conventional whole-cell screens remains disappointingly low. The elucidation of the genome sequence of Mycobacterium tuberculosis (Mtb) facilitated a shift to target-based approaches to drug design but these efforts have proven largely unsuccessful. More recently, regulated gene expression systems that enable dose dependent modulation of gene expression have been applied in target validation to evaluate the requirement of individual genes for the growth of Mtb both in vitro and in vivo. Notably, these systems can also provide a measure of the extent to which putative targets must be depleted in order to manifest a growth inhibitory phenotype. Additionally, the successful implementation of Mtb strains engineered to under-express specific molecular targets in whole-cell screens has enabled the simultaneous identification of cell-permeant inhibitors with defined mechanisms of action. Here, we review the application of tetracycline-regulated gene expression systems in the validation of novel drug targets in Mtb, highlighting both the strengths and limitations associated with this approach to target validation.
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页数:14
相关论文
共 127 条
[1]   Pathway-Selective Sensitization of Mycobacterium tuberculosis for Target-Based Whole-Cell Screening [J].
Abrahams, Garth L. ;
Kumar, Anuradha ;
Savvi, Suzana ;
Hung, Alvin W. ;
Wen, Shijun ;
Abell, Chris ;
Barry, Clifton E., III ;
Sherman, David R. ;
Boshoff, Helena I. M. ;
Mizrahi, Valerie .
CHEMISTRY & BIOLOGY, 2012, 19 (07) :844-854
[2]   Identification of Novel Imidazo[1,2-a]pyridine Inhibitors Targeting M. tuberculosis QcrB [J].
Abrahams, Katherine A. ;
Cox, Jonathan A. G. ;
Spivey, Vickey L. ;
Loman, Nicholas J. ;
Pallen, Mark J. ;
Constantinidou, Chrystala ;
Fernandez, Raquel ;
Alemparte, Carlos ;
Remuinan, Modesto J. ;
Barros, David ;
Ballell, Lluis ;
Besra, Gurdyal S. .
PLOS ONE, 2012, 7 (12)
[3]   VapC Toxins from Mycobacterium tuberculosis Are Ribonucleases that Differentially Inhibit Growth and Are Neutralized by Cognate VapB Antitoxins [J].
Ahidjo, Bintou Ahmadou ;
Kuhnert, Diane ;
McKenzie, Joanna L. ;
Machowski, Edith E. ;
Gordhan, Bhavna G. ;
Arcus, Vickery ;
Abrahams, Garth L. ;
Mizrahi, Valerie .
PLOS ONE, 2011, 6 (06)
[4]   Conditional silencing of topoisomerase I gene of Mycobacterium tuberculosis validates its essentiality for cell survival [J].
Ahmed, Wareed ;
Menon, Shruti ;
Godbole, Adwait Anand ;
Karthik, Pullela V. D. N. B. ;
Nagaraja, Valakunja .
FEMS MICROBIOLOGY LETTERS, 2014, 353 (02) :116-123
[5]   A diarylquinoline drug active on the ATP synthase of Mycobacterium tuberculosis [J].
Andries, K ;
Verhasselt, P ;
Guillemont, J ;
Göhlmann, HWH ;
Neefs, JM ;
Winkler, H ;
Van Gestel, J ;
Timmerman, P ;
Zhu, M ;
Lee, E ;
Williams, P ;
de Chaffoy, D ;
Huitric, E ;
Hoffner, S ;
Cambau, E ;
Truffot-Pernot, C ;
Lounis, N ;
Jarlier, V .
SCIENCE, 2005, 307 (5707) :223-227
[6]   Regulated expression of the Escherichia coli lepB gene as a tool for cellular testing of antimicrobial compounds that inhibit signal peptidase I in vitro [J].
Barbosa, MDFS ;
Lin, S ;
Markwalder, JA ;
Mills, JA ;
DeVito, JA ;
Teleha, CA ;
Garlapati, V ;
Liu, C ;
Thompson, A ;
Trainor, GL ;
Kurilla, MG ;
Pompliano, DL .
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, 2002, 46 (11) :3549-3554
[7]   The spectrum of latent tuberculosis: rethinking the biology and intervention strategies [J].
Barry, Clifton E., III ;
Boshoff, Helena I. ;
Dartois, Veronique ;
Dick, Thomas ;
Ehrt, Sabine ;
Flynn, JoAnne ;
Schnappinger, Dirk ;
Wilkinson, Robert J. ;
Young, Douglas .
NATURE REVIEWS MICROBIOLOGY, 2009, 7 (12) :845-855
[8]  
Begley TP, 2001, VITAM HORM, V61, P157
[9]   Gene regulation by tetracyclines - Constraints of resistance regulation in bacteria shape TetR for application in eukaryotes [J].
Berens, C ;
Hillen, W .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 2003, 270 (15) :3109-3121
[10]   The application of Tet repressor in prokaryotic gene regulation and expression [J].
Bertram, Ralph ;
Hillen, Wolfgang .
MICROBIAL BIOTECHNOLOGY, 2008, 1 (01) :2-16