Salinimonas sediminis sp. nov., a piezophilic bacterium isolated from a deep-sea sediment sample from the New Britain Trench

被引:9
作者
Cao, Junwei [1 ,2 ]
Lai, Qiliang [3 ]
Liu, Ping [1 ,2 ]
Wei, Yuli [1 ,2 ]
Wang, Li [1 ,2 ]
Liu, Rulong [1 ,2 ]
Fang, Jiasong [1 ,4 ,5 ]
机构
[1] Shanghai Ocean Univ, Coll Marine Sci, Shanghai Engn Res Ctr Hadal Sci & Technol, Shanghai 201306, Peoples R China
[2] Shanghai Ocean Univ, Natl Engn Res Ctr Ocean Fisheries, Shanghai 201306, Peoples R China
[3] Collaborat Innovat Ctr Marine Biol Resources, Third Inst State Ocean Adm, State Key Lab Breeding Base Marine Genet Resource, Key Lab Marine Genet Resources Fujian Prov,Key La, Xiamen 361005, Peoples R China
[4] Qingdao Natl Lab Marine Sci & Technol, Lab Marine Biol & Biotechnol, Qingdao 266237, Peoples R China
[5] Hawaii Pacific Univ, Dept Nat Sci, Honolulu, HI 96813 USA
基金
国家重点研发计划; 中国国家自然科学基金;
关键词
Salinimonas sediminis; piezophilic bacterium; taxonomy; GEN; NOV; DEGRADING BACTERIUM; WEB SERVER; RECLASSIFICATION; SEQUENCES;
D O I
10.1099/ijsem.0.003055
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A cold-adapted, piezophilic, slightly halophilic bacterium, designated as N102(T), was isolated from a deep-sea (4700 m) sediment sample collected from the New Britain Trench. Strain N102(T) was Gram-stain-negative, rod-shaped, oxidase- and catalase-positive, and grew optimally at 28 degrees C (range, 4-40 degrees C), pH 7.0-7.5 (range, 6.0-9.0) and 3-4 %(w/v) NaCl (range, 215 %). The optimum pressure for growth was 10 MPa with tolerance up to 70 MPa. 16S rRNA gene sequence analysis showed that strain N102(T) was most closely related to Alteromonas addita R10SW13(T) (97.2 %), Alteromonas stellipolaris LMG 21861(T) (97.1 %), Alteromonas gracilis 9a2(T) (97.1 %), Salinimonas lutimaris DPSR-4(T) (96.1 %) and Salinimonas chungwhensis BH030046(T) (95.4 %). Phylogenetic analyses based on 16S rRNA gene, gyrB gene and whole-genome sequences placed strain N102(T) within the genus Salinimonas. Genomic comparisons based on average nucleotide identity and tetranucleotide signature frequencies corroborated the results of the phylogenetic analyses. The principal fatty acids were summed feature 3 (C-16:1 omega 7c/C-16:1 omega 6c), C-16:0 and summed feature 8 (C-18:1 omega 7c/C-18:1 omega 6c). The major respiratory quinone was ubiquinone 8. The predominant polar lipids were phosphatidylethanolamine, phosphatidylglycerol and an unidentified phospholipid. The G+C content of the genomic DNA was 48.2 mol%. On the basis of phenotypic, chemotaxonomic and molecular data, we conclude that strain N102(T) represents a novel species of the genus Salinimonas, for which the name Salinimonas sediminis sp. nov. is proposed (type strain N102(T)=MCCC 1K03497(T)=KCTC 62440(T)).
引用
收藏
页码:3766 / 3771
页数:6
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