Complete mitochondrial genome of a troglophile Cydnidae (Hemiptera)

被引：1

作者：

Dias, Mariana Costa ^{[1
]}

Moreira Oliveira, Renato Renison ^{[1
]}

Vasconcelos, Santelmo ^{[1
]}

Pires, Eder Soares ^{[1
]}

Prous, Xavier ^{[2
]}

Pietrobon, Thadeu ^{[2
]}

Oliveira, Guilherme ^{[1
]}

机构：

[1] Inst Tecnol Vale, Rua Boaventura da Silva 955, BR-66055090 Belem, Para, Brazil

[2] Vale SA, Speleol, Nova Lima, Brazil

来源：

MITOCHONDRIAL DNA PART B-RESOURCES | 2019年 / 4卷 / 01期

关键词：

mtDNA; mitogenome; Pentatomoidea; pentatomomorpha; burrower bugs;

D O I：

10.1080/23802359.2018.1547153

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

The complete mitochondrial genome of a specimen of Cydnidae was shotgun sequenced and each partition was characterized. This genome, with 15,289 bp in length, has all of the 37 genes commonly found in metazoan mitochondrial genomes: two for ribosomal RNAs (rRNAs), 22 for transfer RNAs (tRNAs), and 13 for proteins. Protein-coding and ribosomal genes have a similar arrangement as in other insects. Phylogenetic relationship of this species with other family groups within the infraorder Pentatomomorpha was inferred using the maximum likelihood method based on the mitogenome. The phylogenetic analysis groups this specimen with the other Cydnidae species within the Pentatomoidea clade.

引用

页码：420 / 422

页数：3

共 10 条

[1] MITOS: Improved de novo metazoan mitochondrial genome annotation [J].

Bernt, Matthias ;

Donath, Alexander ;

Juehling, Frank ;

Externbrink, Fabian ;

Florentz, Catherine ;

Fritzsch, Guido ;

Puetz, Joern ;

Middendorf, Martin ;

Stadler, Peter F. .

MOLECULAR PHYLOGENETICS AND EVOLUTION, 2013, 69 (02) :313-319

[2] Animal mitochondrial genomes [J].

Boore, JL .

NUCLEIC ACIDS RESEARCH, 1999, 27 (08) :1767-1780

[3] NOVOPlasty: de novo assembly of organelle genomes from whole genome data [J].

Dierckxsens, Nicolas ;

Mardulyn, Patrick ;

Smits, Guillaume .

NUCLEIC ACIDS RESEARCH, 2017, 45 (04)

[4]

Gnaspini P, 2000, ECOSY WORLD, V30, P251

[5] Comparative and phylogenomic studies on the mitochondrial genomes of Pentatomomorpha (Insecta: Hemiptera: Heteroptera) [J].

Hua, Jimeng ;

Li, Ming ;

Dong, Pengzhi ;

Cui, Ying ;

Xie, Qiang ;

Bu, Wenjun .

BMC GENOMICS, 2008, 9 (1)

[6] MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability [J].

Katoh, Kazutaka ;

Standley, Daron M. .

MOLECULAR BIOLOGY AND EVOLUTION, 2013, 30 (04) :772-780

[7]

Lis JA, 2010, ZOOTAXA, P53

[8]

Schwertner CF, 2015, ENTOMOL FOCUS, V2, P639, DOI 10.1007/978-94-017-9861-7_21

[9] RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies [J].

Stamatakis, Alexandros .

BIOINFORMATICS, 2014, 30 (09) :1312-1313

[10] Comparative mitogenomic analysis of the superfamily Pentatomoidea (Insecta: Hemiptera: Heteroptera) and phylogenetic implications [J].

Yuan, Ming-Long ;

Zhang, Qi-Lin ;

Guo, Zhong-Long ;

Wang, Juan ;

Shen, Yu-Ying .

BMC GENOMICS, 2015, 16

← 1 →