Isolation and characterization of eleven polymorphic microsatellite markers for the earthworm Aporrectodea longa (Ude)

被引:7
|
作者
Strunk, Heiko [1 ]
Hochkirch, Axel [2 ]
Veith, Michael [2 ]
Hankeln, Thomas [3 ]
Emmerling, Christoph [1 ]
机构
[1] Univ Trier, Dept Soil Sci, D-54296 Trier, Germany
[2] Univ Trier, Dept Biogeog, D-54286 Trier, Germany
[3] GENterprise Genom, D-55128 Mainz, Germany
关键词
Annelida; Microsatellite; Heterozygosity; Population genetics; Land-use change;
D O I
10.1016/j.ejsobi.2011.11.004
中图分类号
Q14 [生态学(生物生态学)];
学科分类号
071012 ; 0713 ;
摘要
Microsatellite markers are a promising tool for accurate estimation of population structure, dispersal and gene flow among populations. We isolated and characterized eleven new polymorphic microsatellite loci for the earthworm Aporrectodea longa (Ude), a widespread Palaearctic species. Polymorphism was tested in 31 individuals collected from one population and ranged from three to 15 alleles per locus. Observed heterozygosity ranged from 0.308 to 0.828, expected heterozygosity varied between 0.380 and 0.891. To the best of our knowledge, the presented microsatellite markers are the first for the species A. longa. Cross-species amplification tests indicated that the presented markers are not usable for other earthworm species. (C) 2011 Elsevier Masson SAS. All rights reserved.
引用
收藏
页码:56 / 58
页数:3
相关论文
共 50 条
  • [1] Isolation of polymorphic microsatellite markers in Aporrectodea icterica (Savigny 1826)
    Torres-Leguizamon, M.
    Mathieu, J.
    Livet, A.
    Decaens, T.
    Dupont, L.
    SOIL BIOLOGY & BIOCHEMISTRY, 2012, 51 : 16 - 19
  • [2] Isolation and characterization of polymorphic microsatellite markers in Anthyllis vulneraria
    Van Glabeke, S.
    Coart, E.
    Honnay, O.
    Roldan-Ruiz, I.
    MOLECULAR ECOLOGY NOTES, 2007, 7 (03): : 477 - 479
  • [3] Isolation and characterization of polymorphic microsatellite markers for the black rockfishSebastes inermis
    Hye Suck An
    Kwang Soo Kim
    Hae Yeong Lee
    Eun Mi Kim
    Mun Gyeong Kwon
    Genes & Genomics, 2009, 31 : 29 - 34
  • [4] Isolation and characterization of polymorphic microsatellite markers for Eupleurogrammus muticus
    Liu, Shufang
    Zu, Dangmin
    Liu, Qi
    Dai, Fangqun
    Ma, Qian
    Zhuang, Zhimeng
    CONSERVATION GENETICS RESOURCES, 2015, 7 (02) : 487 - 488
  • [5] Isolation and characterization of polymorphic microsatellite markers for Eupleurogrammus muticus
    Shufang Liu
    Dangmin Zu
    Qi Liu
    Fangqun Dai
    Qian Ma
    Zhimeng Zhuang
    Conservation Genetics Resources, 2015, 7 : 487 - 488
  • [6] Isolation and Characterization of Polymorphic Microsatellite Markers for the Black Rockfish Sebastes inermis
    An, Hye Suck
    Kim, Kwang Soo
    Lee, Hae Yeong
    Kim, Eun Mi
    Kwon, Mun Gyeong
    GENES & GENOMICS, 2009, 31 (01) : 29 - 34
  • [7] Isolation and characterization of 20 polymorphic microsatellite markers in Macrobrachium nipponense
    Yan Zhao
    Hui Wang
    Xiangshan Ji
    Yongqing Zeng
    Pingping Yang
    Lei Ding
    Conservation Genetics Resources, 2010, 2 : 137 - 139
  • [8] Isolation and characterization of 20 polymorphic microsatellite markers in Macrobrachium nipponense
    Zhao, Yan
    Wang, Hui
    Ji, Xiangshan
    Zeng, Yongqing
    Yang, Pingping
    Ding, Lei
    CONSERVATION GENETICS RESOURCES, 2010, 2 : 137 - 139
  • [9] Isolation and characterization of polymorphic microsatellite DNA markers in the sea squirt Halocynthia roretzi
    Han, Hyon-Sob
    Nam, Bo-Hye
    Kang, Jung-Ha
    Choi, Tae-Jin
    Kim, Woo-Jin
    Hur, Young-Baek
    Yoon, Moongeun
    MOLECULAR ECOLOGY RESOURCES, 2009, 9 (02) : 648 - 650
  • [10] Isolation and characterization of eight polymorphic microsatellites markers for the earthworm Lumbricus terrestris
    Souleman, Dima
    Grumiaux, Fabien
    Frerot, Helene
    Vandenbulcke, Franck
    Pauwels, Maxime
    EUROPEAN JOURNAL OF SOIL BIOLOGY, 2016, 74 : 76 - 80