Coupling between the voltage-sensing and pore domains in a voltage-gated potassium channel

被引:19
作者
Schow, Eric V. [1 ]
Freites, J. Alfredo [1 ]
Nizkorodov, Alex [1 ]
White, Stephen H. [2 ,3 ]
Tobias, Douglas J. [1 ,3 ]
机构
[1] Univ Calif Irvine, Dept Chem, Irvine, CA 92697 USA
[2] Univ Calif Irvine, Dept Physiol & Biophys, Irvine, CA 92697 USA
[3] Univ Calif Irvine, Ctr Biomembrane Syst, Irvine, CA 92697 USA
来源
BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES | 2012年 / 1818卷 / 07期
基金
美国国家科学基金会; 美国国家卫生研究院;
关键词
Ion channel; Voltage-gating; Molecular dynamics simulation; Membrane protein; DEPENDENT K+ CHANNEL; PARTICLE MESH EWALD; GATING-CHARGE; MOLECULAR-DYNAMICS; ELECTROSTATIC INTERACTIONS; INTRACELLULAR GATE; CRYSTAL-STRUCTURE; ION SELECTIVITY; ACTIVATION GATE; SENSOR-DOMAIN;
D O I
10.1016/j.bbamem.2012.02.029
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Voltage-dependent potassium (Kv), sodium (Nay), and calcium channels open and close in response to changes in transmembrane (TM) potential, thus regulating cell excitability by controlling ion flow across the membrane. An outstanding question concerning voltage gating is how voltage-induced conformational changes of the channel voltage-sensing domains (VSDs) are coupled through the S4-S5 interfacial linking helices to the opening and closing of the pore domain (PD). To investigate the coupling between the VSDs and the PD, we generated a closed Kv channel configuration from Aeropyrum pernix (KvAP) using atomistic simulations with experiment-based restraints on the VSDs. Full closure of the channel required, in addition to the experimentally determined TM displacement, that the VSDs be displaced both inwardly and laterally around the PD. This twisting motion generates a tight hydrophobic interface between the S4-S5 linkers and the C-terminal ends of the pore domain S6 helices in agreement with available experimental evidence. (C) 2012 Elsevier B.V. All rights reserved.
引用
收藏
页码:1726 / 1736
页数:11
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