NMR spectroscopy of paramagnetic metalloproteins

被引:250
作者
Bertini, I
Luchinat, C
Parigi, G
Pierattelli, R
机构
[1] Univ Florence, Magnet Resonance Ctr, I-50019 Sesto Fiorentino, Italy
[2] Univ Florence, Dept Chem, I-50019 Sesto Fiorentino, Italy
[3] Univ Florence, Dept Agr Biotechnol, I-50144 Florence, Italy
关键词
D O I
10.1002/cbic.200500124
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
This article deals with the solution structure determination of paramagnetic metalloproteins by NMR spectroscopy. These proteins were believed not to be suitable for NMR investigations for structure determination until a decade ago, but eventually novel experiments and software protocols were developed, with the aim of making the approach suitable for the goal and as user-friendly and safe as possible. In the article, we also give hints for the optimization of experiments with respect to each particular metal ion, with respect to each particular metal ion, with the aim of also providing a handy tool for non-specialists. Finally, a section is dedicated to the significant progress made on C-13 direct detection, which reduces the negative effects of paramagnetism and may constitute a new chapter in the whole field of NMR spectroscopy.
引用
收藏
页码:1536 / 1549
页数:14
相关论文
共 153 条
  • [1] Abragam A., 1970, ELECT PARAMAGNETIC R
  • [2] Lanthanide-induced pseudocontact shifts for solution structure refinements of macromolecules in shells up to 40 Å from the metal ion
    Allegrozzi, M
    Bertini, I
    Janik, MBL
    Lee, YM
    Lin, GH
    Luchinat, C
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2000, 122 (17) : 4154 - 4161
  • [3] Spin-state selection filters for the measurement of heteronuclear one-bond coupling constants
    Andersson, P
    Weigelt, J
    Otting, G
    [J]. JOURNAL OF BIOMOLECULAR NMR, 1998, 12 (03) : 435 - 441
  • [4] A hint to search for metalloproteins in gene banks
    Andreini, C
    Bertini, I
    Rosato, A
    [J]. BIOINFORMATICS, 2004, 20 (09) : 1373 - 1380
  • [5] Solution structure of the oxidized Fe7S8 ferredoxin from the thermophilic bacterium Bacillus schlegelii by 1H NMR spectroscopy
    Aono, S
    Bentrop, D
    Bertini, I
    Donaire, A
    Luchinat, C
    Niikura, Y
    Rosato, A
    [J]. BIOCHEMISTRY, 1998, 37 (27) : 9812 - 9826
  • [6] A strategy for the NMR characterization of type II copper(II) proteins:: the case of the copper trafficking protein CopC from Pseudomonas syringae
    Arnesano, F
    Banci, L
    Bertini, I
    Felli, IC
    Luchinat, C
    Thompsett, AR
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2003, 125 (24) : 7200 - 7208
  • [7] A redox switch in CopC: An intriguing copper trafficking protein that binds copper(I) and copper(II) at different sites
    Arnesano, F
    Banci, L
    Bertini, I
    Mangani, S
    Thompsett, AR
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (07) : 3814 - 3819
  • [8] Solution structure of human β-parvalbumin and structural comparison with its paralog α-parvalbumin and with their rat orthologs
    Babini, E
    Bertini, I
    Capozzi, F
    Del Bianco, C
    Hollender, D
    Kiss, T
    Luchinat, C
    Quattrone, A
    [J]. BIOCHEMISTRY, 2004, 43 (51) : 16076 - 16085
  • [9] Direct carbon detection in paramagnetic metalloproteins to further exploit pseudocontact shift restraints
    Babini, E
    Bertini, I
    Capozzi, F
    Felli, IC
    Lelli, M
    Luchinat, C
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2004, 126 (34) : 10496 - 10497
  • [10] Paramagnetism-based refinement strategy for the solution structure of human α-parvalbumin
    Baig, I
    Bertini, I
    Del Bianco, C
    Gupta, YK
    Lee, YM
    Luchinat, C
    Quattrone, A
    [J]. BIOCHEMISTRY, 2004, 43 (18) : 5562 - 5573