Identification of key constituents in volatile oil of Ligusticum chuanxiong based on data mining approaches

被引:16
作者
Chen, Chang [1 ]
Chen, Jianxin [2 ]
Wu, Hongwei [1 ]
Tang, Shihuan [1 ]
Li, Geng [1 ]
Yi, Jianqiang [3 ]
Yang, Hongjun [1 ]
机构
[1] China Acad Chinese Med Sci, Inst Chinese Mat Med, Beijing 100700, Peoples R China
[2] Beijing Univ Chinese Med, Beijing, Peoples R China
[3] Chinese Acad Sci, Inst Automat, Beijing, Peoples R China
关键词
Ligusticum chuanxiong Hort; volatile oil; GC-MS; blood vessel activity; feature selection; LARS; LASSO; REGRESSION;
D O I
10.3109/13880209.2010.523426
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Objective: Identification of key constituents in volatile oil (VO) of Ligusticum chuanxiong Hort (Umbelliferae) (LCH), which is a CHM clinically used in China thousands of years ago. Materials and methods: The VO of LCH was pharmacologically demonstrated to have blood vessel activity (BVA) in vitro and chemically investigated by gas chromatography-mass spectrometry (GC-MS) analysis. Data mining approaches were used to bridge the gap between chemical constituents (CCS) and bioactivities as well as contribute to select key constituents of LCH automatically. Results: Thirteen effective constituents of LCH with significant association with BVA were identified. Conclusion: The combination of 13 key constituents would accurately predict the bioactivities of blood vessel of LCH. Furthermore, the strategy presented here paves a strong basis for identification of key constituents of CH and elucidation of material basis of CHM.
引用
收藏
页码:445 / 455
页数:11
相关论文
共 6 条
[1]  
*CHIN PHARM COMM, 2010, CHIN PHARM, V1, P38
[2]   Least angle regression - Rejoinder [J].
Efron, B ;
Hastie, T ;
Johnstone, I ;
Tibshirani, R .
ANNALS OF STATISTICS, 2004, 32 (02) :494-499
[3]   Screening, analysis and in vitro vasodilatation of effective components from Ligusticum Chuanxiong [J].
Liang, MJ ;
He, LC ;
Yang, GD .
LIFE SCIENCES, 2005, 78 (02) :128-133
[5]   NEW DRUG R&D OF TRADITIONAL CHINESE MEDICINE: ROLE OF DATA MINING APPROACHES [J].
Yang, Hongjun ;
Chen, Jianxin ;
Tang, Shihuan ;
Li, Zhenkun ;
Zhen, Yisong ;
Huang, Luqi ;
Yi, Jianqiang .
JOURNAL OF BIOLOGICAL SYSTEMS, 2009, 17 (03) :329-347
[6]   Analysis of the volatile compounds in Ligusticum chuanxiong Hort. using HS-SPME-GC-MS [J].
Zhang, Cong ;
Qi, Meiling ;
Shao, Qinglong ;
Zhou, Shan ;
Fu, Ruonong .
JOURNAL OF PHARMACEUTICAL AND BIOMEDICAL ANALYSIS, 2007, 44 (02) :464-470