Pyrene-perylene as a FRET pair coupled to the N2′-functionality of 2′-amino-LNA

被引:45
|
作者
Lindegaard, Dorthe [1 ]
Madsen, Andreas S. [1 ]
Astakhova, Irina V. [2 ]
Malakhov, Andrei D. [2 ]
Babu, B. Ravindra [1 ]
Korshun, Vladimir A. [2 ]
Wengel, Jesper [1 ]
机构
[1] Univ So Denmark, Nucl Acid Ctr, DK-5230 Odense, Denmark
[2] Russian Acad Sci, Shemyakin Ouchinnilov Inst Bioorgan Chem, Moscow 117997, Russia
基金
俄罗斯基础研究基金会;
关键词
D O I
10.1016/j.bmc.2007.04.056
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Detection of nucleic acid hybridization via fluorescence resonance energy transfer (FRET) using pyren-1-ylmethyl and perylen-3-ylmethyl NT-functionalized 2'-amino-LNA nucleosides incorporated into oligonucleotides exhibited a clear distance dependence of the FRET efficiency, ranging from below 10% when the fluorophores were approximately 40 A apart to approximately 90% when the fluorophores were in close proximity. (C) 2007 Elsevier Ltd. All rights reserved.
引用
收藏
页码:94 / 99
页数:6
相关论文
共 50 条
  • [1] CARB 60-Pyrene-perylene as a FRET pair coupled to the N2'-functionality of 2'-amino-LNA
    Madsen, Andreas S.
    Lindegaard, Dorthe
    Astakhova, Irina V.
    Malakhov, Andrei D.
    Babu, B. Ravindra
    Korshun, Vladimir A.
    Wengel, Jesper
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2007, 234
  • [2] Branched DNA nanostructures efficiently stabilised and monitored by novel pyrene-perylene 2′-α-L-amino-LNA FRET pairs
    Astakhova, I. Kira
    Kumar, T. Santhosh
    Campbell, Meghan A.
    Ustinov, Alexey V.
    Korshun, Vladimir A.
    Wengel, Jesper
    CHEMICAL COMMUNICATIONS, 2013, 49 (05) : 511 - 513
  • [3] Improved synthesis of 2′-amino-LNA
    Christensen, SM
    Rosenbohm, C
    Sorensen, M
    Larsen, LE
    Wengel, J
    Koch, T
    NUCLEOSIDES NUCLEOTIDES & NUCLEIC ACIDS, 2003, 22 (5-8): : 1131 - 1133
  • [4] Functionalization of 2′-amino-LNA with additional nucleobases
    Umemoto, Tadashi
    Wengel, Jesper
    Madsen, Andreas Stahl
    ORGANIC & BIOMOLECULAR CHEMISTRY, 2009, 7 (09) : 1793 - 1797
  • [5] Synthesis of 2′-amino-LNA purine nucleosides
    Ravn, Jacob
    Rosenbohm, Christoph
    Christensen, Signe M.
    Koch, Troels
    NUCLEOSIDES NUCLEOTIDES & NUCLEIC ACIDS, 2006, 25 (08): : 843 - 847
  • [6] Synthesis of 2′-amino-LNA:: a new strategy
    Rosenbohm, C
    Christensen, SM
    Sorensen, MD
    Pedersen, DS
    Larsen, LE
    Wengel, J
    Koch, T
    ORGANIC & BIOMOLECULAR CHEMISTRY, 2003, 1 (04) : 655 - 663
  • [7] Perylene Attached to 2′-Amino-LNA: Synthesis, Incorporation into Oligonucleotides, and Remarkable Fluorescence Properties in Vitro and in Cell Culture
    Astakhova, Irina V.
    Korshun, Vladimir A.
    Jahn, Kasper
    Kjems, Jorgen
    Wengel, Jesper
    BIOCONJUGATE CHEMISTRY, 2008, 19 (10) : 1995 - 2007
  • [8] Enzymatic polymerisation involving 2′-amino-LNA nucleotides
    Johannsen, Marie W.
    Veedu, Rakesh N.
    Madsen, Andreas Stahl
    Wengel, Jesper
    BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 2012, 22 (10) : 3522 - 3526
  • [9] ENZYMATIC SYNTHESIS OF OLIGONUCLEOTIDES WITH 2′-AMINO-LNA TRIPHOSPHATES AND TEMPLATES
    Johannsen, Marie W.
    Veedu, Rakesh N.
    Vester, Birte
    Wengel, Jesper
    NUCLEIC ACID THERAPEUTICS, 2011, 21 (05) : A14 - A14
  • [10] SYNTHESIS AND HYBRIDIZATION PROPERTIES OF OLIGONUCLEOTIDES INCLUDING 2′-N-ALKOXYCARBONYL-2′-AMINO-LNA DERIVATIVES
    Osawa, Takashi
    Yamashita, Shoko
    Nakanishi, Ayumi
    Ito, Yuta
    Hari, Yoshiyuki
    HETEROCYCLES, 2019, 99 (01) : 502 - 520