International Ring Trial for the Validation of an Event-Specific Golden Rice 2 Quantitative Real-Time Polymerase Chain Reaction Method

被引:9
|
作者
Jacchia, Sara [1 ]
Nardini, Elena [1 ]
Bassani, Niccolo [1 ]
Savini, Christian [1 ]
Shim, Jung-Hyun [2 ]
Trijatmiko, Kurniawan [2 ]
Kreysa, Joachim [1 ]
Mazzara, Marco [1 ]
机构
[1] European Commiss Joint Res Ctr, Inst Hlth & Consumer Protect, Mol Biol & Genom Unit, I-21027 Ispra, Varese, Italy
[2] Int Rice Res Inst, Plant Breeding Genet & Biotechnol Div, Los Banos 4031, Laguna, Philippines
关键词
international validation; Golden Rice 2 (GR2); quantitative real-time PR (qPCR); genetically modified organism (GMO); endogenous taxon-specific gene; event-specific method; GENETICALLY-MODIFIED ORGANISMS; SUCROSE-PHOSPHATE-SYNTHASE; ENDOGENOUS REFERENCE GENE; BETA-CAROTENE; VITAMIN-A; FOOD; QUANTIFICATION; PATHWAY; TRENDS; GMOS;
D O I
10.1021/acs.jafc.5b00951
中图分类号
S [农业科学];
学科分类号
09 ;
摘要
This article describes the international validation of the quantitative real-time polymerase chain reaction (PCR) detection method for Golden Rice 2. The method consists of a taxon-specific assay amplifying a fragment of rice Phospholipase D alpha 2 gene, and an event-specific assay designed on the 3' junction between transgenic insert and plant DNA. We validated the two assays independently, with absolute quantification, and in combination, with relative quantification, on DNA samples prepared in haploid genome equivalents. We assessed trueness, precision, efficiency, and linearity of the two assays, and the results demonstrate that both the assays independently assessed and the entire method fulfill European and international requirements for methods for genetically modified organism (GMO) testing, within the dynamic range tested. The homogeneity of the results of the collaborative trial between Europe and Asia is a good indicator of the robustness of the method.
引用
收藏
页码:4954 / 4965
页数:12
相关论文
共 50 条
  • [1] Development, Optimization, and Single Laboratory Validation of an Event-Specific Real-Time PCR Method for the Detection and Quantification of Golden Rice 2 Using a Novel Taxon-Specific Assay
    Jacchia, Sara
    Nardini, Elena
    Savini, Christian
    Petrillo, Mauro
    Angers-Loustau, Alexandre
    Shim, Jung-Hyun
    Trijatmiko, Kurniawan
    Kreysa, Joachim
    Mazzara, Marco
    JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 2015, 63 (06) : 1711 - 1721
  • [2] Development and Interlaboratories Validation of Event-Specific Quantitative Real-Time PCR Method for Genetically Modified Rice G6H1 Event
    Yang, Litao
    Yang, Yu
    Jin, Wujun
    Zhang, Xiujie
    Li, Xiaying
    Wu, Yuhua
    Li, Jun
    Li, Liang
    JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 2018, 66 (30) : 8179 - 8186
  • [3] Collaborative Validation of an Event-Specific Quantitative Real-Time PCR Method for Genetically Modified Rice Event TT51-1 Detection
    Wu, Yuhua
    Yang, Litao
    Cao, Yinglong
    Song, Guiwen
    Shen, Ping
    Zhang, Dabing
    Wu, Gang
    JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 2013, 61 (25) : 5953 - 5960
  • [4] Development and collaborative validation of an event-specific quantitative real-time PCR method for detection of genetically modified CC-2 maize
    Long, Likun
    Zhao, Ning
    Li, Congcong
    He, Yuxuan
    Dong, Liming
    Yan, Wei
    Xing, Zhenjuan
    Xia, Wei
    Ma, Yue
    Xie, Yanbo
    Liu, Na
    Li, Feiwu
    FRONTIERS IN PLANT SCIENCE, 2024, 15
  • [5] Development of an Event-Specific Detection Method for Genetically Modified Maize IE034 by Quantitative Real-Time PCR
    Li, Feiwu
    Long, Likun
    Yan, Wei
    Li, Congcong
    Xu, Junfeng
    Liu, Yunjun
    Zhang, Shihong
    FOOD ANALYTICAL METHODS, 2017, 10 (06) : 1727 - 1735
  • [6] Multiplex event-specific qualitative polymerase chain reaction for detecting three transgenic rice lines and application of a standard plasmid as a quantitative reference molecule
    Wang, Xiaofu
    Chen, Xiaoyun
    Xu, Junfeng
    Wang, Pengfei
    Shen, Wenbiao
    ANALYTICAL BIOCHEMISTRY, 2014, 464 : 1 - 8
  • [7] Development of an Event-Specific Detection Method for Genetically Modified Maize IE034 by Quantitative Real-Time PCR
    Feiwu Li
    Likun Long
    Wei Yan
    Congcong Li
    Junfeng Xu
    Yunjun Liu
    Shihong Zhang
    Food Analytical Methods, 2017, 10 : 1727 - 1735
  • [8] Selection and validation of reference genes for quantitative real-time polymerase chain reaction analyses of Serratia ureilytica DW2
    Bai, Fenglin
    Bai, Bianxia
    Jin, Tingting
    Zhang, Guiping
    Ren, Jiahong
    BIOCELL, 2023, 47 (03) : 647 - 656
  • [9] A rapid real-time quantitative polymerase chain reaction for hepatitis B virus
    Brechtbuehl, K
    Whalley, SA
    Dusheiko, GM
    Saunders, NA
    JOURNAL OF VIROLOGICAL METHODS, 2001, 93 (1-2) : 105 - 113
  • [10] Validation of reference genes for quantitative real-time polymerase chain reaction in Drosophila melanogaster exposed to two chemicals
    Kim, YeongHo
    Kim, YiSeul
    Kim, Donghun
    Kim, SeYeon
    Seo, GyeongJin
    Shin, SooHyun
    Lee, JaeYoung
    Kim, Young Ho
    ENTOMOLOGICAL RESEARCH, 2019, 49 (06) : 277 - +