ASCL2 Affects the Efficacy of Immunotherapy in Colon Adenocarcinoma Based on Single-Cell RNA Sequencing Analysis

被引:4
作者
Wu, Lei [1 ,2 ,3 ]
Sun, Shengnan [1 ,2 ]
Qu, Fei [4 ]
Liu, Xiuxiu [1 ,2 ]
Sun, Meili [3 ]
Pan, Ying [5 ]
Zheng, Yan [1 ]
Su, Guohai [1 ,2 ]
机构
[1] Shandong First Med Univ, Res Ctr Translat Med, Cent Hosp, Jinan, Peoples R China
[2] Shandong Univ, Jinan Cent Hosp, Res Ctr Translat Med, Jinan, Peoples R China
[3] Shandong First Med Univ, Dept Oncol, Cent Hosp, Zhuhai, Peoples R China
[4] Shandong First Med Univ, Dept Pathol, Cent Hosp, Jinan, Peoples R China
[5] Jinan Univ, Dept Oncol, Zhuhai Peoples Hosp, Zhuhai Hosp, Zhuhai, Peoples R China
来源
FRONTIERS IN IMMUNOLOGY | 2022年 / 13卷
关键词
colon adenocarcinoma; single-cell RNA-seq; microsatellite stable; microsatellite instability-high; immunotherapy; MICROSATELLITE INSTABILITY; CANCER; EXPRESSION; ACTIVATION; BLOCKADE; SURVIVAL; PREDICT; DUSP4;
D O I
10.3389/fimmu.2022.829640
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
Colon adenocarcinoma (COAD) is one of the leading causes of cancer-associated deaths worldwide. Patients with microsatellite instability-high (MSI-H) tumors were shown to highly benefit from immune checkpoint inhibitors (ICIs) than patients with microsatellite stable (MSS) tumors. Furthermore, the infiltration of immune cells and the expression of cancer stem cells (CSCs) in COAD were associated with the anti-tumor immune response. However, the potential mechanisms showing the relationship between microsatellite instability and CSCs or tumor-infiltrating immune cells (TIICs) have not been elucidated. Accumulating evidence reveals that achaete-scute family bHLH transcription factor 2 (ASCL2) plays a crucial role in the initiation and progression of COAD and drug resistance. However, the specific biological functions of ASCL2 in COAD remain unknown. In this study, we performed weighted gene co-expression network analysis (WGCNA) between MSS and MSI-H subsets of COAD. The results revealed that ASCL2 was a potential key candidate in COAD. Subsequently, the single-cell RNA-seq revealed that ASCL2 was positively associated with CSCs. Further, ASCL2 was shown to indirectly affect tumor immune cell infiltration by negatively regulating the expression of DUSP4. Finally, we inferred that the immunotherapy-sensitive role of ASCL2/DUSP4 axis on COAD is partly attributed to the activation of WNT/beta-catenin pathway. In conclusion, this study revealed that ASCL2 was positively correlated to CSCs and tumor immune infiltration in COAD. Therefore, ASCL2 is a promising predictor of clinical responsiveness to anti-PD-1/PD-L1 therapy in COAD.
引用
收藏
页数:15
相关论文
共 50 条
  • [31] Benchmark and Parameter Sensitivity Analysis of Single-Cell RNA Sequencing Clustering Methods
    Krzak, Monika
    Raykov, Yordan
    Boukouvalas, Alexis
    Cutillo, Luisa
    Angelini, Claudia
    FRONTIERS IN GENETICS, 2019, 10
  • [32] Bioinformatics analysis and single-cell RNA sequencing: elucidating the ubiquitination pathways and key enzymes in lung adenocarcinoma
    Lu, Tong
    Xu, Ran
    Wang, Chenghao
    Zhou, Xiang
    Parra-Medina, Rafael
    Diaz-Pena, Roberto
    Peng, Bo
    Zhang, Linyou
    JOURNAL OF THORACIC DISEASE, 2023, 15 (07) : 3885 - +
  • [33] Power analysis of single-cell RNA-sequencing experiments
    Svensson, Valentine
    Natarajan, Kedar Nath
    Ly, Lam-Ha
    Miragaia, Ricardo J.
    Labalette, Charlotte
    Macaulay, Iain C.
    Cvejic, Ana
    Teichmann, Sarah A.
    NATURE METHODS, 2017, 14 (04) : 381 - +
  • [34] Aneuploidy: An opportunity within single-cell RNA sequencing analysis
    Delaney, Joe R.
    BIOCELL, 2021, 45 (05) : 1167 - 1170
  • [35] Insights into the heterogeneity of the tumor microenvironment in lung adenocarcinoma and squamous carcinoma through single-cell transcriptomic analysis: Implications for distinct immunotherapy outcomes
    Fang, Xinyun
    Li, Dianke
    Wan, Shiyue
    Hu, Junjie
    Zhang, Peng
    Jie, Dai
    Chen, Linsong
    Jiang, Gening
    Song, Nan
    JOURNAL OF GENE MEDICINE, 2024, 26 (06)
  • [36] Single-cell RNA sequencing revealed potential targets for immunotherapy studies in hepatocellular carcinoma
    Xie, Zhouhua
    Huang, Jinping
    Li, Yanjun
    Zhu, Qingdong
    Huang, Xianzhen
    Chen, Jieling
    Wei, Cailing
    Luo, Shunda
    Yang, Shixiong
    Gao, Jiamin
    SCIENTIFIC REPORTS, 2023, 13 (01)
  • [37] Single-cell RNA sequencing highlights epithelial and microenvironmental heterogeneity in malignant progression of pancreatic ductal adenocarcinoma
    Li, Jin
    Wei, Tao
    Ma, Ke
    Zhang, Jian
    Lu, Jianfeng
    Zhao, Jianhui
    Huang, Jinyan
    Zeng, Tao
    Xie, Yali
    Liang, Yingjiqiong
    Li, Xuejie
    Zhang, Qi
    Liang, Tingbo
    CANCER LETTERS, 2024, 584
  • [38] The heterogeneous immune landscape between lung adenocarcinoma and squamous carcinoma revealed by single-cell RNA sequencing
    Wang, Chengdi
    Yu, Qiuxiao
    Song, Tingting
    Wang, Zhoufeng
    Song, Lujia
    Yang, Ying
    Shao, Jun
    Li, Jingwei
    Ni, Yinyun
    Chao, Ningning
    Zhang, Li
    Li, Weimin
    SIGNAL TRANSDUCTION AND TARGETED THERAPY, 2022, 7 (01)
  • [39] RNA modification-related EIF4G2 is an immunotherapy determinant in osteosarcoma: A single-cell sequencing analysis
    Qin, Haocheng
    Yang, Shu
    Feng, Zhennan
    Wu, Song
    Cai, Ting
    Xie, Zijing
    Hu, Hai
    ENVIRONMENTAL TOXICOLOGY, 2024, : 4547 - 4561
  • [40] Construction and Validation of a Ferroptosis-Related Prognostic Signature for Melanoma Based on Single-Cell RNA Sequencing
    Liu, Yating
    Shou, Yanhong
    Zhu, Ronghui
    Qiu, Zhuoqiong
    Zhang, Qi
    Xu, Jinhua
    FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY, 2022, 10