Paenibacillus allorhizosphaerae sp. nov., from soil of the rhizosphere of Zea mays

被引:8
作者
Kaempfer, Peter [1 ]
Busse, Hans-Juergen [2 ]
McInroy, John A. [3 ]
Clermont, Dominique [4 ]
Criscuolo, Alexis [5 ]
Glaeser, Stefanie P. [1 ]
机构
[1] Univ Giessen, Inst Angew Mikrobiol, Giessen, Germany
[2] Vet Med Univ, Inst Mikrobiol, A-1210 Vienna, Austria
[3] Auburn Univ, Dept Entomol & Plant Pathol, Auburn, AL 36849 USA
[4] Inst Pasteur, CIP Collect Inst Pasteur, Paris, France
[5] Inst Pasteur, Hub Bioinformat & Biostat, Dept Biol Computat, Paris, France
关键词
Paenibacillus allorhizosphaerae; taxonomy; Zea mays; endophyte; plant associated; ENDOPHYTIC BACTERIUM; LIPID-COMPOSITION; IDENTIFICATION; SEQUENCE; PHYLLOSPHERE; MEMBERS; TAXA; GENE;
D O I
10.1099/ijsem.0.005051
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram-stain-positive, aerobic, endospore-forming bacterial strain, isolated from the rhizosphere of Zea mays, was studied for its detailed taxonomic allocation. Based on 16S rRNA gene sequence similarity comparisons, strain JJ-447(T) was shown to be a member of the genus Paenibacillus, most closely related to the type strain of Paenibacillus solanacearum (97.8 %). The 16S rRNA gene sequence similarity values to all other Paenibacillus species were below 97.0 %. DNA-DNA hybridization (DDH) values with the type strain of P. solanacearum were 35.9 % (reciprocal 27%), respectively. The average nucleotide identity and in silico DDH values with the type strain of P. solanacearum were 84.86 and 28.9 %, respectively. The quinone system of strain JJ-447(T) consisted exclusively of menaquinones and the major component was MK-7 (96.4 %) but minor amounts of MK-6 (3.6 %) were detected as well. The polar lipid profile consisted of the major components diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol and an unidentified aminolipid. Major fatty acids were iso-and anteiso-branched with the major compounds anteiso-C-15:0 and iso-C-15:0. Physiological and biochemical characteristics allowed a further phenotypic differentiation of strain JJ-447(T) from the most closely related species on the basis of D-glucose, L-arabinose and D-mannose assimilation and other physiological tests. Thus, JJ-447(T) represents a novel species of the genus Paenibacillus, for which the name Paenibacillus allorhizosphaerae sp. nov. is proposed, with JJ-447(T) (=LMG 31601(T)=CCM 9021(T)=CIP 111802(T)) as the type strain.
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页数:8
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