Hydrophobic pocket docking, double-proton prototropic tautomerism in contradiction to single-proton transfer in thione ↔thiol Schiff base with triazole-thione moiety: Green synthesis, XRD and DFT-analysis

被引:37
作者
Aouad, Mohamed Reda [1 ]
Messali, Mouslim [1 ]
Rezki, Nadjet [1 ,2 ]
Said, Musa A. [1 ]
Lentz, Dieter [3 ]
Zubaydi, Lana [4 ]
Warad, Ismail [5 ]
机构
[1] Taibah Univ, Dept Chem, Al Madina Al Mounawam 30002, Saudi Arabia
[2] Univ Sci & Technol Mohamed Boudiaf, BP 1505, Oran, El M Nouar, Algeria
[3] Free Univ Berlin, Anorgan Chem, Inst Chem & Biochem, Fabeckstr 34-36, D-19195 Berlin, Germany
[4] An Najah Natl Univ, Coll Pharm, POB 7, Nablus, Palestine
[5] An Najah Natl Univ, Sci Coll, Dept Chem, POB 7, Nablus, Palestine
关键词
Triazole; Prototropic tautomerism; Docking; XRD; DFT; 1,3,4-THIADIAZOLE; 1,3,4-OXADIAZOLE; COMPLEXES; BINDING; CHAIN;
D O I
10.1016/j.molstruc.2018.12.010
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
In the present study, an eco-friendly and efficient microwave-assisted synthesis of the (E)-4-(3,4-difluorobenzylidene)amino)-2,4-dihydro-5-methyl-3H-1,2,4-triazole-3-thione Schiff base ligand was described. XRD-single crystal analysis reflected the molecule occurs in an exo-thione tautomeric form in solid state. Therefore, gaseous-phase prototropic thione thiol tautomerism occurrence probability via single-proton intramigration and push/pull protons self-assemble double proton transfer exchange was DFT-computed. The newly designed thione-tautomer was well-characterized by MS, FT-IR, CHN-EA, F-19, H-1,C-13 NMR, and XRD analysis. High degree of matching was recorded by comparing the experiment XRD exo-thione-tautomer structure parameters by their relatives DFT-optimized parameters. Moreover, the computed MEP and HSA surface interactions were compared to H-bonds and pi-pi stack interactions obtained by XRD-packing analyses. Docking studies reflected the compound as DNA strong hydrophobic pocket binder. (C) 2018 Elsevier B.V. All rights reserved.
引用
收藏
页码:455 / 461
页数:7
相关论文
共 34 条
[1]   Schiff bases of indoline-2,3-dione (isatin) derivatives and nalidixic acid carbohydrazide, synthesis, antitubercular activity and pharmacophoric model building [J].
Aboul-Fadl, Tarek ;
Bin-Jubair, Fayzah A. S. ;
Aboul-Wafa, Omima .
EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY, 2010, 45 (10) :4578-4586
[2]   1,2,4-Triazole/oxime hybrids as new strategy for nitric oxide donors: Synthesis, anti-inflammatory, ulceroginicity and antiproliferative activities [J].
Abuo-Rahma, Gamal El-Din A. A. ;
Abdel-Aziz, Mohamed ;
Beshr, Eman A. M. ;
Ali, Taha F. S. .
EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY, 2014, 71 :185-198
[3]   Synthesis and anticancer activity of long chain substituted 1,3,4-oxadiazol-2-thione, 1,2,4-triazol-3-thione and 1,2,4-triazolo [3,4-b]-1,3,4-thiadiazine derivatives [J].
Ahmad, Aiman ;
Varshney, Himani ;
Rauf, Abdul ;
Sherwani, Asif ;
Owais, Mohammad .
ARABIAN JOURNAL OF CHEMISTRY, 2017, 10 :S3347-S3357
[4]  
[Anonymous], 2014, INT J ADV RES COMPUT
[5]  
[Anonymous], J MOL STRUCT
[6]  
[Anonymous], MERCK INDEX ENCY CHE
[7]  
[Anonymous], J BIOCH MOL TOXICOL
[8]  
[Anonymous], 1999, MOD DRUG DISCOV
[9]   Single proton intramigration in novel 4-phenyl-3-((4-phenyl-1H-1,2,3-triazol-1-yl)methyl)-1H-1,2,4-triazole-5(4H)-thione: XRD-crystal interactions, physicochemical, thermal, Hirshfeld surface, DFT realization of thiol/thione tautomerism [J].
Aouad, Mohamed Reda ;
Messali, Mouslim ;
Rezki, Nadjet ;
Al-Zaqri, Nabil ;
Warad, Ismail .
JOURNAL OF MOLECULAR LIQUIDS, 2018, 264 :621-630
[10]   Design, synthesis, in silico and in vitro antimicrobial screenings of novel 1,2,4-triazoles carrying 1,2,3-triazole scaffold with lipophilic side chain tether [J].
Aouad, Mohamed Reda ;
Mayaba, Mariem Mohammed ;
Naqvi, Arshi ;
Bardaweel, Sanaa K. ;
Al-blewi, Fawzia Faleh ;
Messali, Mouslim ;
Rezki, Nadjet .
CHEMISTRY CENTRAL JOURNAL, 2017, 11