Dimension Reduction for the Emulation of Cardiac Electrophysiology Models for Single Cells and Tissue

被引:0
|
作者
Lawson, Brodie A. J. [1 ]
Drovandi, Chris C. [1 ]
Burrage, Pamela [1 ]
Rodriguez, Blanca [2 ]
Burrage, Kevin [1 ,2 ]
机构
[1] Queensland Univ Technol, ARC Ctr Excellence Math & Stat Frontiers, Brisbane, Qld, Australia
[2] Univ Oxford, Dept Comp Sci, Oxford, England
来源
关键词
VARIABILITY;
D O I
10.22489/CinC.2017.309-340
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Widespread variability in the electrophysiological behaviour of individual cardiac cells, as well as between the hearts of different members of a population, presents a significant challenge to both the biological and mathematical understanding of cardiology. This variability underpins the differential responses to heterogeneities in pathologies of the heart, and to drug treatments, and so a thorough understanding is critical. A range of techniques exist for both uncertainty quantification and exploration of variability in mathematical models, but these require evaluation of the model at large numbers of points in a parameter space and the complexity of these models can make such analyses prohibitively computationally expensive. We demonstrate the use of dimension reduction to allow Gaussian processes to emulate the complex spatiotemporal outputs of heart models, thus making studies of variability feasible. Significant improvements in computational speed are achieved.
引用
收藏
页数:4
相关论文
共 50 条
  • [1] ELECTROPHYSIOLOGY OF SINGLE CARDIAC CELLS
    CRANEFIELD, PF
    HOFFMAN, BF
    PHYSIOLOGICAL REVIEWS, 1958, 38 (01) : 41 - 76
  • [2] A Brief History of Tissue Models For Cardiac Electrophysiology
    Henriquez, Craig S.
    IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING, 2014, 61 (05) : 1457 - 1465
  • [3] ELECTROPHYSIOLOGY OF SINGLE CARDIAC-CELLS
    IRISAWA, H
    JAPANESE JOURNAL OF PHYSIOLOGY, 1984, 34 (03): : 375 - 388
  • [4] Models of cardiac tissue electrophysiology: Progress, challenges and open questions
    Clayton, R. H.
    Bernus, O.
    Cherry, E. M.
    Dierckx, H.
    Fenton, F. H.
    Mirabella, L.
    Panfilov, A. V.
    Sachse, F. B.
    Seemann, G.
    Zhang, H.
    PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY, 2011, 104 (1-3): : 22 - 48
  • [5] Incorporating inductances in tissue-scale models of cardiac electrophysiology
    Rossi, Simone
    Griffith, Boyce E.
    CHAOS, 2017, 27 (09)
  • [7] Considerations for the use of cellular electrophysiology models within cardiac tissue simulations
    Cooper, Jonathan
    Corrias, Alberto
    Gavaghan, David
    Noble, Denis
    PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY, 2011, 107 (01): : 74 - 80
  • [8] A Quantitative Comparison of the Behavior of Human Ventricular Cardiac Electrophysiology Models in Tissue
    Elshrif, Mohamed M.
    Cherry, Elizabeth M.
    PLOS ONE, 2014, 9 (01):
  • [9] Modulation of cardiac electrophysiology by tissue alignment
    Chung, C.
    Dasari, V.
    Bien, H.
    Entcheva, E.
    2007 IEEE 33RD ANNUAL NORTHEAST BIOENGINEERING CONFERENCE, 2007, : 165 - +
  • [10] Reduction of radiation exposure in the cardiac electrophysiology laboratory
    Wittkampf, FHM
    Wever, EFD
    Vos, K
    Geleijns, J
    Schalij, MJ
    Van der Tol, J
    De Medina, EOR
    PACE-PACING AND CLINICAL ELECTROPHYSIOLOGY, 2000, 23 (11): : 1638 - 1644