W-IQ-TREE: a fast online phylogenetic tool for maximum likelihood analysis

被引：3914
作者：
Trifinopoulos, Jana [1 ]
Lam-Tung Nguyen [1 ]
von Haeseler, Arndt [1 ,2 ]
Minh, Bui Quang [1 ]
机构：
[1] Med Univ Vienna, Ctr Integrat Bioinformat, Univ Vienna, Max F Perutz Labs, A-1030 Vienna, Austria
[2] Univ Vienna, Fac Comp Sci, Bioinformat & Computat Biol, A-1090 Vienna, Austria
来源：
NUCLEIC ACIDS RESEARCH | 2016年 / 44卷 / W1期
基金：
奥地利科学基金会;
关键词：
PROTEIN EVOLUTION; INFERENCE; SELECTION; MODELS; RATES; APPROXIMATION; BOOTSTRAP; SCHEMES; SITES;
D O I：
10.1093/nar/gkw256
中图分类号：
Q5 [生物化学]; Q7 [分子生物学];
学科分类号：
071010 ; 081704 ;
摘要：
This article presents W-IQ-TREE, an intuitive and user-friendly web interface and server for IQ-TREE, an efficient phylogenetic software for maximum likelihood analysis. W-IQ-TREE supports multiple sequence types (DNA, protein, codon, binary and morphology) in common alignment formats and a wide range of evolutionary models including mixture and partitionmodels. W-IQ-TREE performs fast model selection, partition scheme finding, efficient tree reconstruction, ultrafast bootstrapping, branch tests, and tree topology tests. All computations are conducted on a dedicated computer cluster and the users receive the results via URL or email. W-IQ-TREE is available at http://iqtree.cibiv.univie.ac.at. It is free and open to all users and there is no login requirement.
引用
收藏
页码：W232 / W235
页数：4
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