A Specific Interaction of L-Tryptophan with CO of CO-Bound Indoleamine 2,3-Dioxygenase Identified by Resonance Raman Spectroscopy

被引:9
|
作者
Yanagisawa, Sachiko [1 ,2 ]
Sugimoto, Hiroshi [3 ]
Shiro, Yoshitsugu [3 ]
Ogura, Takashi [1 ,2 ]
机构
[1] Univ Hyogo, Dept Life Sci, Kamigori, Hyogo 6781297, Japan
[2] Univ Hyogo, Picobiol Inst, Grad Sch Life Sci, Kamigori, Hyogo 6781297, Japan
[3] RIKEN SPring 8 Ctr, Biomet Sci Lab, Sayo, Hyogo 6795148, Japan
关键词
O BENDING VIBRATIONS; HEME-PROTEINS; HORSERADISH-PEROXIDASE; STRETCHING MODE; HEMOGLOBIN; DIOXYGENASE; BINDING; PROBE; CONFIGURATION; ASSIGNMENT;
D O I
10.1021/bi1009997
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Indoleamine 2,3-dioxygenase (IDO) is a heme enzyme which catalyzes dioxygenation of L-Trp (tryptophan), yielding N-formylkynurenine. IDO thus plays a key role in L-Trp catabolism in mammals. In the present study, resonance Raman (RR) spectra of the reduced carbon monoxide- (CO-) bound form of IDO were measured in order to gain insights into the active site environment of O-2. Binding of CO to L-Trp-bound IDO causes a significant change in the electronic and RR spectra of the heme, indicating that the pi* orbitals of the carbon atom of CO interact with pi orbitals of Fe and the porphyrin. On the other hand, binding of CO to D-Trp-bound IDO does not induce the same change. This is also the case with substrate-free IDO. Based on the distinct absorption spectra and RR bands of the vibrational signature of CO (v(CO), delta(FeCO), and v(Fe-CO)) of the L-Trp-bound species relative to the other two species, it is confirmed that sterically constrained geometry of the Fe-O-O unit exists as previously reported (Terentis, A. C., et al. (2002) J. Biol. Chem. 277, 15788-15794). In contrast, binding of D-Trp does not induce such constraint. The comparable values of V-max reported for L-Trp and D-Trp are interpreted as a result of a change in the rate-limiting step in the reaction cycle of the enzyme induced by the D-enantiomer relative to the L-enantiomer. Enhancements of the overtone and the combination Raman modes of the Fe-CO stretching vibration are evident. The anharmonicity of the Fe-CO stretching oscillator is significantly higher than those of oxygen carrier proteins. This is a specific character of IDO and might be responsible for the unique reactivity of this enzyme.
引用
收藏
页码:10081 / 10088
页数:8
相关论文
共 5 条
  • [1] Oxidation of L-tryptophan in biology: a comparison between tryptophan 2,3-dioxygenase and indoleamine 2,3-dioxygenase
    Rafice, Sara A.
    Chauhan, Nishma
    Efimov, Igor
    Basran, Jaswir
    Raven, Emma Lloyd
    BIOCHEMICAL SOCIETY TRANSACTIONS, 2009, 37 : 408 - 412
  • [2] UV Resonance Raman Characterization of a Substrate Bound to Human Indoleamine 2,3-Dioxygenase 1
    Yanagisawa, Sachiko
    Kayama, Kure'e
    Hara, Masayuki
    Sugimoto, Hiroshi
    Shiro, Yoshitsugu
    Ogura, Takashi
    BIOPHYSICAL JOURNAL, 2019, 117 (04) : 706 - 716
  • [3] Resonance Raman study on indoleamine 2,3-dioxygenase: Control of reactivity by substrate-binding
    Yanagisawa, Sachiko
    Hara, Masayuki
    Sugimoto, Hiroshi
    Shiro, Yoshitsugu
    Ogura, Takashi
    CHEMICAL PHYSICS, 2013, 419 : 178 - 183
  • [4] Resonance Raman study on the oxygenated and the ferryl-oxo species of indoleamine 2,3-dioxygenase during catalytic turnover
    Yanagisawa, Sachiko
    Horitani, Masaki
    Sugimoto, Hiroshi
    Shiro, Yoshitsugu
    Okada, Norihiro
    Ogura, Takashi
    FARADAY DISCUSSIONS, 2011, 148 : 239 - 247
  • [5] Differences between two active forms of CO-bound soluble guanylate cyclase in the presence of activators and substrate and their populations revealed by resonance Raman spectroscopy
    Pal, Biswajit
    Kitagawa, Teizo
    INDIAN JOURNAL OF CHEMISTRY SECTION A-INORGANIC BIO-INORGANIC PHYSICAL THEORETICAL & ANALYTICAL CHEMISTRY, 2011, 50 (3-4): : 395 - 400