Bicc1 and Dicer regulate left-right patterning through post-transcriptional control of the Nodal inhibitor Dand5

被引:27
作者
Maerker, Markus [1 ]
Getwan, Maike [6 ]
Dowdle, Megan E. [2 ]
McSheene, Jason C. [3 ]
Gonzalez, Vanessa [3 ]
Pelliccia, Jose L. [3 ]
Hamilton, Danielle S. [3 ]
Yartseva, Valeria [4 ]
Vejnar, Charles [4 ]
Tingler, Melanie [1 ]
Minegishi, Katsura [5 ]
Vick, Philipp [1 ]
Giraldez, Antonio J. [4 ]
Hamada, Hiroshi [5 ]
Burdine, Rebecca D. [3 ]
Sheets, Michael D. [2 ]
Blum, Martin [1 ]
Schweickert, Axel [1 ]
机构
[1] Univ Hohenheim, Inst Biol, Dept Zool, Stuttgart, Germany
[2] Univ Wisconsin, Dept Biomol Chem, Madison, WI USA
[3] Princeton Univ, Dept Mol Biol, Princeton, NJ USA
[4] Yale Univ, Sch Med, Dept Genet, New Haven, CT 06510 USA
[5] RIKEN Ctr Biosyst Dynam Res, Lab Organismal Patterning, Kobe, Hyogo, Japan
[6] Univ Zurich, Inst Anat, Zurich, Switzerland
基金
美国国家卫生研究院; 日本学术振兴会; 日本科学技术振兴机构;
关键词
LEFT-RIGHT AXIS; MUSCLE-SPECIFIC MICRORNAS; LEFT-RIGHT ASYMMETRY; BICAUDAL-C; FLUID-FLOW; MESSENGER-RNA; KUPFFERS VESICLE; MOUSE EMBRYO; TGF-BETA; XENOPUS;
D O I
10.1038/s41467-021-25464-z
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The authors show that post-transcriptional regulation of the cilia-driven leftward flow target dand5 is central to symmetry breakage in frog, fish and mouse and is mediated by a 139 nt Bicc1 responsive element in the dand5 3 ' UTR, and they present evidence that Pkd2 regulates this Bicc1/dand5 module. Rotating cilia at the vertebrate left-right organizer (LRO) generate an asymmetric leftward flow, which is sensed by cells at the left LRO margin. Ciliary activity of the calcium channel Pkd2 is crucial for flow sensing. How this flow signal is further processed and relayed to the laterality-determining Nodal cascade in the left lateral plate mesoderm (LPM) is largely unknown. We previously showed that flow down-regulates mRNA expression of the Nodal inhibitor Dand5 in left sensory cells. De-repression of the co-expressed Nodal, complexed with the TGFss growth factor Gdf3, drives LPM Nodal cascade induction. Here, we show that post-transcriptional repression of dand5 is a central process in symmetry breaking of Xenopus, zebrafish and mouse. The RNA binding protein Bicc1 was identified as a post-transcriptional regulator of dand5 and gdf3 via their 3 '-UTRs. Two distinct Bicc1 functions on dand5 mRNA were observed at pre- and post-flow stages, affecting mRNA stability or flow induced translational inhibition, respectively. To repress dand5, Bicc1 co-operates with Dicer1, placing both proteins in the process of flow sensing. Intriguingly, Bicc1 mediated translational repression of a dand5 3 '-UTR mRNA reporter was responsive to pkd2, suggesting that a flow induced Pkd2 signal triggers Bicc1 mediated dand5 inhibition during symmetry breakage.
引用
收藏
页数:15
相关论文
共 66 条
[11]   The role of microRNA-1 and microRNA-133 in skeletal muscle proliferation and differentiation [J].
Chen, JF ;
Mandel, EM ;
Thomson, JM ;
Wu, QL ;
Callis, TE ;
Hammond, SM ;
Conlon, FL ;
Wang, DZ .
NATURE GENETICS, 2006, 38 (02) :228-233
[12]   Bicaudal-C recruits CCR4-NOT deadenylase to target mRNAs and regulates oogenesis, cytoskeletal organization, and its own expression [J].
Chicoine, Jarred ;
Benoit, Perrine ;
Gamberi, Chiara ;
Paliouras, Miltiadis ;
Simonelig, Martine ;
Lasko, Paul .
DEVELOPMENTAL CELL, 2007, 13 (05) :691-704
[13]   STAR: ultrafast universal RNA-seq aligner [J].
Dobin, Alexander ;
Davis, Carrie A. ;
Schlesinger, Felix ;
Drenkow, Jorg ;
Zaleski, Chris ;
Jha, Sonali ;
Batut, Philippe ;
Chaisson, Mark ;
Gingeras, Thomas R. .
BIOINFORMATICS, 2013, 29 (01) :15-21
[14]   The activation of membrane targeted CaMK-II in the zebrafish Kupffer's vesicle is required for left-right asymmetry [J].
Francescatto, Ludmila ;
Rothschild, Sarah C. ;
Myers, Alexandra L. ;
Tombes, Robert M. .
DEVELOPMENT, 2010, 137 (16) :2753-2762
[15]   MicroRNAs regulate brain morphogenesis in zebrafish [J].
Giraldez, AJ ;
Cinalli, RM ;
Glasner, ME ;
Enright, AJ ;
Thomson, JM ;
Baskerville, S ;
Hammond, SM ;
Bartel, DP ;
Schier, AF .
SCIENCE, 2005, 308 (5723) :833-838
[16]   MMP21 is mutated in human heterotaxy and is required for normal left-right asymmetry in vertebrates [J].
Guimier, Anne ;
Gabriel, George C. ;
Bajolle, Fanny ;
Tsang, Michael ;
Liu, Hui ;
Noll, Aaron ;
Schwartz, Molly ;
El Malti, Rajae ;
Smith, Laurie D. ;
Klena, Nikolai T. ;
Jimenez, Gina ;
Miller, Neil A. ;
Oufadem, Myriam ;
de Bellaing, Anne Moreau ;
Yagi, Hisato ;
Saunders, Carol J. ;
Baker, Candice N. ;
Di Filippo, Sylvie ;
Peterson, Kevin A. ;
Thiffault, Isabelle ;
Bole-Feysot, Christine ;
Cooley, Linda D. ;
Farrow, Emily G. ;
Masson, Cecile ;
Schoen, Patric ;
Deleuze, Jean-Francois ;
Nitschke, Patrick ;
Lyonnet, Stanislas ;
de Pontual, Loic ;
Murray, Stephen A. ;
Bonnet, Damien ;
Kingsmore, Stephen F. ;
Amiel, Jeanne ;
Bouvagnet, Patrice ;
Lo, Cecilia W. ;
Gordon, Christopher T. .
NATURE GENETICS, 2015, 47 (11) :1260-+
[17]  
Hamada Hiroshi, 2020, F1000Res, V9, DOI 10.12688/f1000research.21670.1
[18]   Identification of PNG kinase substrates uncovers interactions with the translational repressor TRAL in the oocyte-to-embryo transition [J].
Hara, Masatoshi ;
Lourido, Sebastian ;
Petrova, Boryana ;
Lou, Hua Jane ;
Von Stetina, Jessica R. ;
Kashevsky, Helena ;
Turk, BenjaminE ;
Orr-Weaver, Terry L. .
ELIFE, 2018, 7
[19]   The RNaseIII enzyme Dicer is required for morphogenesis but not patterning of the vertebrate limb [J].
Harfe, BD ;
McManus, MT ;
Mansfield, JH ;
Hornstein, E ;
Tabin, CJ .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2005, 102 (31) :10898-10903
[20]   Right-elevated expression of charon is regulated by fluid flow in medaka Kupffer's vesicle [J].
Hojo, Motoki ;
Takashima, Shigeo ;
Kobayashi, Daisuke ;
Sumeragi, Akira ;
Shimada, Atsuko ;
Tsukahara, Tatsuya ;
Yokoi, Hayato ;
Narita, Takanori ;
Jindo, Tomoko ;
Kage, Takahiro ;
Kitagawa, Tadao ;
Kimura, Tetsuaki ;
Sekimizu, Koshin ;
Miyake, Akimitsu ;
Setiamarga, Davin ;
Murakami, Ryohei ;
Tsuda, Sachiko ;
Ooki, Shinya ;
Kakihara, Ken ;
Naruse, Kiyoshi ;
Takeda, Hiroyuki .
DEVELOPMENT GROWTH & DIFFERENTIATION, 2007, 49 (05) :395-405