Chemical Crosslinking-Mass Spectrometry (CXL-MS) for Proteomics, Antibody-Drug Conjugates (ADCs) and Cryo-Electron Microscopy (cryo-EM)

被引:5
作者
Pal, Shreya [1 ]
Ganesan, Keerthiga [2 ]
Eswaran, Sambasivan [3 ]
机构
[1] Amity Univ Haryana, Manesar, Haryana, India
[2] SASTRA Deemed Be Univ, Thanjavur, Tamil Nadu, India
[3] Reg Ctr Biotechnol, NCR Biotech Sci Cluster, 3rd Milestone,Faridabad Gurgaon Expressway, Faridabad 121001, Haryana, India
关键词
chemical crosslinkers; proteomics; antibody-drug conjugates; cryo-EM; STRUCTURAL BIOLOGY; PROTEIN STRUCTURES; RESOLUTION; VISUALIZATION; COMPLEX; CHEMISTRY; SOFTWARE; IMAGE;
D O I
10.1002/iub.1916
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Chemical crosslinking-mass spectrometry (CXL-MS) has emerged as a powerful tool in structural biology to elucidate protein-protein interactions. This review throws light on the advent of these technologies incorporating chemical crosslinking in proteomics, structural biology and extended to studies and applications of antibody-drug conjugates (ADCs). Monoclonal ASCs are known to target their specific receptors, where the drug could be released for vastly improved therapeutic effect. Cryo-electron microscopy (cryo-EM) is being referred to as the revolution of the century as it can help attain almost atomic resolution, while preserving the biological samples at near-native state and has been recognized by the Nobel award 2017. CXL-MS and appropriate bioinformatics tools in combination with cryo-EM reveal better 3D information about dynamic interactions in proteins, interactive domains and motifs, among others in ADCs and in viruses like Zika virus, Rota virus, Dengue virus and also spliceosomes at resolutions, especially below 3 angstrom. (c) 2018 IUBMB Life, 70(10):947-960, 2018
引用
收藏
页码:947 / 960
页数:14
相关论文
共 56 条
  • [1] Site-Specific Antibody-Drug Conjugates: The Nexus of Biciorthogonal Chemistry, Protein Engineering, and Drug Development
    Agarwal, Paresh
    Bertozzi, Carolyn R.
    [J]. BIOCONJUGATE CHEMISTRY, 2015, 26 (02) : 176 - 192
  • [2] INTERACTIONS AND STRUCTURE OF THE NUCLEAR-PORE COMPLEX REVEALED BY CRYO-ELECTRON MICROSCOPY
    AKEY, CW
    [J]. JOURNAL OF CELL BIOLOGY, 1989, 109 (03) : 955 - 970
  • [3] [Anonymous], 2015, SCI REP-UK
  • [4] Cryo-EM structures of the human INO80 chromatin-remodeling complex
    Aramayo, Ricardo J.
    Willhoft, Oliver
    Ayala, Rafael
    Bythell-Douglas, Rohan
    Wigley, Dale B.
    Zhang, Xiaodong
    [J]. NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2018, 25 (01) : 37 - +
  • [5] Three-dimensional structure of the native spliceosome by cryo-electron microscopy
    Azubel, M
    Wolf, SG
    Sperling, J
    Sperling, R
    [J]. MOLECULAR CELL, 2004, 15 (05) : 833 - 839
  • [6] 2.2 Å resolution cryo-EM structure of β-galactosidase in complex with a cell-permeant inhibitor
    Bartesaghi, Alberto
    Merk, Alan
    Banerjee, Soojay
    Matthies, Doreen
    Wu, Xiongwu
    Milne, Jacqueline L. S.
    Subramaniam, Sriram
    [J]. SCIENCE, 2015, 348 (6239) : 1147 - 1151
  • [7] Structure of the Ebola virus glycoprotein spike within the virion envelope at 11Å resolution
    Beniac, Daniel
    Booth, Timothy F.
    [J]. SCIENTIFIC REPORTS, 2017, 7
  • [8] Structure of the 26S proteasome from Schizosaccharomyces pombe at subnanometer resolution
    Bohn, Stefan
    Beck, Florian
    Sakata, Eri
    Walzthoeni, Thomas
    Beck, Martin
    Aebersold, Ruedi
    Foerster, Friedrich
    Baumeister, Wolfgang
    Nickell, Stephan
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2010, 107 (49) : 20992 - 20997
  • [9] 2.8 Å resolution reconstruction of the Thermoplasma acidophilum 20S proteasome using cryo-electron microscopy
    Campbell, Melody G.
    Veesler, David
    Cheng, Anchi
    Potter, Clinton S.
    Carragher, Bridget
    [J]. ELIFE, 2015, 4 : 1 - 22
  • [10] Antibody- Drug Conjugates: An Emerging Concept in Cancer Therapy
    Chari, Ravi V. J.
    Miller, Michael L.
    Widdison, Wayne C.
    [J]. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2014, 53 (15) : 3796 - 3827