Refining Genotype-Phenotype Correlation in Autosomal Dominant Polycystic Kidney Disease

被引:129
作者
Hwang, Young-Hwan [1 ,2 ]
Conklin, John [3 ]
Chan, Winnie [2 ]
Roslin, Nicole M. [4 ]
Liu, Jannel [2 ]
He, Ning [2 ]
Wang, Kairong [2 ]
Sundsbak, Jamie L. [5 ]
Heyer, Christina M. [5 ]
Haider, Masoom [3 ]
Paterson, Andrew D. [4 ]
Harris, Peter C. [5 ]
Pei, York [2 ]
机构
[1] Eulji Gen Hosp, Dept Med, Seoul, South Korea
[2] Univ Hlth Network, Div Nephrol, 8N838,585 Univ Ave, Toronto, ON M5G2N2, Canada
[3] Univ Hlth Network, Dept Med Imaging, Toronto, ON M5G2N2, Canada
[4] Hosp Sick Children, Program Genet & Genome Biol, 555 Univ Ave, Toronto, ON M5G 1X8, Canada
[5] Mayo Clin, Div Nephrol & Hypertens, Rochester, MN USA
来源
JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY | 2016年 / 27卷 / 06期
基金
美国国家卫生研究院;
关键词
MOLECULAR DIAGNOSTICS; MODIFIER GENES; RENAL-FUNCTION; MUTATED GENE; MUTATIONS; SEVERITY; DOSAGE; VOLUME;
D O I
10.1681/ASN.2015060648
中图分类号
R5 [内科学]; R69 [泌尿科学(泌尿生殖系疾病)];
学科分类号
1002 ; 100201 ;
摘要
Renal disease variability in autosomal dominant polycystic kidney disease (ADPKD) is strongly influenced by the gene locus (PKD1 versus PKD2). Recent studies identified nontruncating PKD1 mutations in approximately 30% of patients who underwent comprehensive mutation screening, but the clinical significance of these mutations is not well defined. We examined the genotype-renal function correlation in a prospective cohort of 220 unrelated ADPKD families ascertained through probands with serum creatinine <= 1.4 mg/dl at recruitment. We screened these families for PKD1 and PKD2 mutations and reviewed the clinical outcomes of the probands and affected family members. Height-adjusted total kidney volume (htTKV) was obtained in 161 affected subjects. Multivariate Cox proportional hazard modeling for renal and patient survival was performed in 707 affected probands and family members. Overall, we identified pathogenic mutations in 84.5% of our families, in which the prevalence of PKD1 truncating, PKD1 in-frame insertion/deletion, PKD1 nontruncating, and PKD2 mutations was 38.3%, 4.3%, 27.1%, and 30.3%, respectively. Compared with patients with PKD1 truncating mutations, patients with PKD1 in-frame insertion/deletion, PKD1 nontruncating, or PKD2 mutations have smaller htTKV and reduced risks (hazard ratio [95% confidence interval]) of ESRD (0.35 [0.14 to 0.91], 0.10 [0.05 to 0.18], and 0.03 [0.01 to 0.05], respectively) and death (0.31 [0.11 to 0.87], 0.20 [0.11 to 0.38], and 0.18 [0.11 to 0.31], respectively). Refined genotype-renal disease correlation coupled with targeted next generation sequencing of PKD1 and PKD2 may provide useful clinical prognostication for ADPKD.
引用
收藏
页码:1861 / 1868
页数:8
相关论文
共 31 条
[1]   A method and server for predicting damaging missense mutations [J].
Adzhubei, Ivan A. ;
Schmidt, Steffen ;
Peshkin, Leonid ;
Ramensky, Vasily E. ;
Gerasimova, Anna ;
Bork, Peer ;
Kondrashov, Alexey S. ;
Sunyaev, Shamil R. .
NATURE METHODS, 2010, 7 (04) :248-249
[2]   Family History of Renal Disease Severity Predicts the Mutated Gene in ADPKD [J].
Barua, Moumita ;
Cil, Onur ;
Paterson, Andrew D. ;
Wang, Kairon ;
He, Ning ;
Dicks, Elizabeth ;
Parfrey, Patrick ;
Pei, York .
JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY, 2009, 20 (08) :1833-1838
[3]   Mutations in Multiple PKD Genes May Explain Early and Severe Polycystic Kidney Disease [J].
Bergmann, Carsten ;
von Bothmer, Jennifer ;
Bruechle, Nadina Ortiz ;
Venghaus, Andreas ;
Frank, Valeska ;
Fehrenbach, Henry ;
Hampel, Tobias ;
Pape, Lars ;
Buske, Annegret ;
Jonsson, Jon ;
Sarioglu, Nanette ;
Santos, Antonia ;
Ferreira, Jose Carlos ;
Becker, Jan U. ;
Cremer, Reinhold ;
Hoefele, Julia ;
Benz, Marcus R. ;
Weber, Lutz T. ;
Buettner, Reinhard ;
Zerres, Klaus .
JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY, 2011, 22 (11) :2047-2056
[4]   Kidney Volume and Functional Outcomes in Autosomal Dominant Polycystic Kidney Disease [J].
Chapman, Arlene B. ;
Bost, James E. ;
Torres, Vicente E. ;
Guay-Woodford, Lisa ;
Bae, Kyongtae Ty ;
Landsittel, Douglas ;
Li, Jie ;
King, Bernard F. ;
Martin, Diego ;
Wetzel, Louis H. ;
Lockhart, Mark E. ;
Harris, Peter C. ;
Moxey-Mims, Marva ;
Flessner, Mike ;
Bennett, William M. ;
Grantham, Jared J. .
CLINICAL JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY, 2012, 7 (03) :479-486
[5]   Predicting the Functional Effect of Amino Acid Substitutions and Indels [J].
Choi, Yongwook ;
Sims, Gregory E. ;
Murphy, Sean ;
Miller, Jason R. ;
Chan, Agnes P. .
PLOS ONE, 2012, 7 (10)
[6]   Characterization of large rearrangements in autosomal dominant polycystic kidney disease and the PKD1/TSC2 contiguous gene syndrome [J].
Consugar, Mark B. ;
Wong, Wai C. ;
Lundquist, Patrick A. ;
Rossetti, Sandro ;
Kubly, Vickie J. ;
Walker, Denise L. ;
Rangel, Laureano J. ;
Aspinwall, Richard ;
Niaudet, W. Patrick ;
Ozen, Seza ;
David, Albert ;
Velinov, Milen ;
Bergstralh, Eric J. ;
Bae, Kyongtae T. ;
Chapman, Arlene B. ;
Guay-Woodford, Lisa M. ;
Grantham, Jared J. ;
Torres, Vicente E. ;
Sampson, Julian R. ;
Dawson, Brian D. ;
Harris, Peter C. .
KIDNEY INTERNATIONAL, 2008, 74 (11) :1468-1479
[7]   Type of PKD1 Mutation Influences Renal Outcome in ADPKD [J].
Cornec-Le Gall, Emilie ;
Audrezet, Marie-Pierre ;
Chen, Jian-Min ;
Hourmant, Maryvonne ;
Morin, Marie-Pascale ;
Perrichot, Regine ;
Charasse, Christophe ;
Whebe, Bassem ;
Renaudineau, Eric ;
Jousset, Philippe ;
Guillodo, Marie-Paule ;
Grall-Jezequel, Anne ;
Saliou, Philippe ;
Ferec, Claude ;
Le Meur, Yannick .
JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY, 2013, 24 (06) :1006-1013
[8]   Human Splicing Finder: an online bioinformatics tool to predict splicing signals [J].
Desmet, Francois-Olivier ;
Hamroun, Dalil ;
Lalande, Marine ;
Collod-Beroud, Gwenaelle ;
Claustres, Mireille ;
Beroud, Christophe .
NUCLEIC ACIDS RESEARCH, 2009, 37 (09)
[9]   Incident renal events and risk factors in autosomal dominant polycystic kidney disease: A population and family-based cohort followed for 22 years [J].
Dicks, Elizabeth ;
Ravani, Pietro ;
Langman, Deanna ;
Davidson, William S. ;
Pei, York ;
Parfrey, Patrick S. .
CLINICAL JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY, 2006, 1 (04) :710-717
[10]   Modifier genes play a significant role in the phenotypic expression of PKD1 [J].
Fain, PR ;
McFann, KK ;
Taylor, MRG ;
Tison, M ;
Johnson, AM ;
Reed, B ;
Schrier, RW .
KIDNEY INTERNATIONAL, 2005, 67 (04) :1256-1267