Deep Learning Using CT Images to Grade Clear Cell Renal Cell Carcinoma: Development and Validation of a Prediction Model
被引:19
作者:
Xu, Lifeng
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h-index: 0
机构:
Wenzhou Med Univ, Quzhou Affiliated, Quzhou Peoples Hosp, Quzhou 324000, Peoples R China
Univ Elect Sci & Technol China, Yangtze Delta Reg Inst Quzhou, Quzhou 324000, Peoples R ChinaWenzhou Med Univ, Quzhou Affiliated, Quzhou Peoples Hosp, Quzhou 324000, Peoples R China
Xu, Lifeng
[1
,2
]
Yang, Chun
论文数: 0引用数: 0
h-index: 0
机构:
Univ Elect Sci & Technol China, Yangtze Delta Reg Inst Quzhou, Quzhou 324000, Peoples R China
Univ Elect Sci & Technol China, Chengdu 610000, Peoples R ChinaWenzhou Med Univ, Quzhou Affiliated, Quzhou Peoples Hosp, Quzhou 324000, Peoples R China
Yang, Chun
[2
,3
]
Zhang, Feng
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h-index: 0
机构:
Wenzhou Med Univ, Quzhou Affiliated, Quzhou Peoples Hosp, Quzhou 324000, Peoples R ChinaWenzhou Med Univ, Quzhou Affiliated, Quzhou Peoples Hosp, Quzhou 324000, Peoples R China
Zhang, Feng
[1
]
Cheng, Xuan
论文数: 0引用数: 0
h-index: 0
机构:
Univ Elect Sci & Technol China, Yangtze Delta Reg Inst Quzhou, Quzhou 324000, Peoples R China
Univ Elect Sci & Technol China, Chengdu 610000, Peoples R ChinaWenzhou Med Univ, Quzhou Affiliated, Quzhou Peoples Hosp, Quzhou 324000, Peoples R China
Cheng, Xuan
[2
,3
]
Wei, Yi
论文数: 0引用数: 0
h-index: 0
机构:
Sichuan Univ, West China Hosp, Chengdu 610000, Peoples R ChinaWenzhou Med Univ, Quzhou Affiliated, Quzhou Peoples Hosp, Quzhou 324000, Peoples R China
Wei, Yi
[4
]
Fan, Shixiao
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h-index: 0
机构:
Univ Elect Sci & Technol China, Yangtze Delta Reg Inst Quzhou, Quzhou 324000, Peoples R China
Univ Elect Sci & Technol China, Chengdu 610000, Peoples R ChinaWenzhou Med Univ, Quzhou Affiliated, Quzhou Peoples Hosp, Quzhou 324000, Peoples R China
Fan, Shixiao
[2
,3
]
Liu, Minghui
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机构:
Univ Elect Sci & Technol China, Yangtze Delta Reg Inst Quzhou, Quzhou 324000, Peoples R China
Univ Elect Sci & Technol China, Chengdu 610000, Peoples R ChinaWenzhou Med Univ, Quzhou Affiliated, Quzhou Peoples Hosp, Quzhou 324000, Peoples R China
Liu, Minghui
[2
,3
]
He, Xiaopeng
论文数: 0引用数: 0
h-index: 0
机构:
Sichuan Univ, West China Hosp, Chengdu 610000, Peoples R China
Southwest Med Univ, Affiliated Hosp, Luzhou 646000, Peoples R ChinaWenzhou Med Univ, Quzhou Affiliated, Quzhou Peoples Hosp, Quzhou 324000, Peoples R China
He, Xiaopeng
[4
,5
]
Deng, Jiali
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机构:
Univ Elect Sci & Technol China, Yangtze Delta Reg Inst Quzhou, Quzhou 324000, Peoples R China
Univ Elect Sci & Technol China, Chengdu 610000, Peoples R ChinaWenzhou Med Univ, Quzhou Affiliated, Quzhou Peoples Hosp, Quzhou 324000, Peoples R China
Deng, Jiali
[2
,3
]
Xie, Tianshu
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Univ Elect Sci & Technol China, Yangtze Delta Reg Inst Quzhou, Quzhou 324000, Peoples R China
Univ Elect Sci & Technol China, Chengdu 610000, Peoples R ChinaWenzhou Med Univ, Quzhou Affiliated, Quzhou Peoples Hosp, Quzhou 324000, Peoples R China
Xie, Tianshu
[2
,3
]
Wang, Xiaomin
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机构:
Univ Elect Sci & Technol China, Yangtze Delta Reg Inst Quzhou, Quzhou 324000, Peoples R China
Univ Elect Sci & Technol China, Chengdu 610000, Peoples R ChinaWenzhou Med Univ, Quzhou Affiliated, Quzhou Peoples Hosp, Quzhou 324000, Peoples R China
Wang, Xiaomin
[2
,3
]
Liu, Ming
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机构:
Univ Elect Sci & Technol China, Yangtze Delta Reg Inst Quzhou, Quzhou 324000, Peoples R China
Univ Elect Sci & Technol China, Chengdu 610000, Peoples R ChinaWenzhou Med Univ, Quzhou Affiliated, Quzhou Peoples Hosp, Quzhou 324000, Peoples R China
Liu, Ming
[2
,3
]
Song, Bin
论文数: 0引用数: 0
h-index: 0
机构:
Sichuan Univ, West China Hosp, Chengdu 610000, Peoples R ChinaWenzhou Med Univ, Quzhou Affiliated, Quzhou Peoples Hosp, Quzhou 324000, Peoples R China
Song, Bin
[4
]
机构:
[1] Wenzhou Med Univ, Quzhou Affiliated, Quzhou Peoples Hosp, Quzhou 324000, Peoples R China
[2] Univ Elect Sci & Technol China, Yangtze Delta Reg Inst Quzhou, Quzhou 324000, Peoples R China
[3] Univ Elect Sci & Technol China, Chengdu 610000, Peoples R China
[4] Sichuan Univ, West China Hosp, Chengdu 610000, Peoples R China
[5] Southwest Med Univ, Affiliated Hosp, Luzhou 646000, Peoples R China
clear cell renal cell carcinoma;
deep learning;
tumor grading;
self-supervised learning;
label noise;
class imbalance;
D O I:
10.3390/cancers14112574
中图分类号:
R73 [肿瘤学];
学科分类号:
100214 ;
摘要:
Simple Summary Clear cell renal cell carcinoma (ccRCC) pathologic grade identification is essential to both monitoring patients' conditions and constructing individualized subsequent treatment strategies. However, biopsies are typically used to obtain the pathological grade, entailing tremendous physical and mental suffering as well as heavy economic burden, not to mention the increased risk of complications. Our study explores a new way to provide grade assessment of ccRCC on the basis of the individual's appearance on CT images. A deep learning (DL) method that includes self-supervised learning is constructed to identify patients with high grade for ccRCC. We confirmed that our grading network can accurately differentiate between different grades of CT scans of ccRCC patients using a cohort of 706 patients from West China Hospital. The promising diagnostic performance indicates that our DL framework is an effective, non-invasive and labor-saving method for decoding CT images, offering a valuable means for ccRCC grade stratification and individualized patient treatment. This retrospective study aimed to develop and validate deep-learning-based models for grading clear cell renal cell carcinoma (ccRCC) patients. A cohort enrolling 706 patients (n = 706) with pathologically verified ccRCC was used in this study. A temporal split was applied to verify our models: the first 83.9% of the cases (years 2010-2017) for development and the last 16.1% (year 2018-2019) for validation (development cohort: n = 592; validation cohort: n = 114). Here, we demonstrated a deep learning(DL) framework initialized by a self-supervised pre-training method, developed with the addition of mixed loss strategy and sample reweighting to identify patients with high grade for ccRCC. Four types of DL networks were developed separately and further combined with different weights for better prediction. The single DL model achieved up to an area under curve (AUC) of 0.864 in the validation cohort, while the ensembled model yielded the best predictive performance with an AUC of 0.882. These findings confirms that our DL approach performs either favorably or comparably in terms of grade assessment of ccRCC with biopsies whilst enjoying the non-invasive and labor-saving property.
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Univ Ulsan, Asan Med Ctr, Dept Radiol, Coll Med, 88,Olymp Ro 43 Gil, Seoul 05505, South KoreaUniv Ulsan, Asan Med Ctr, Dept Radiol, Coll Med, 88,Olymp Ro 43 Gil, Seoul 05505, South Korea
Choi, S. J.
Park, K. J.
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Univ Ulsan, Inst Life Sci, Coll Med, Seoul 05505, South KoreaUniv Ulsan, Asan Med Ctr, Dept Radiol, Coll Med, 88,Olymp Ro 43 Gil, Seoul 05505, South Korea
Heo, C.
Park, B. W.
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Univ Ulsan, Inst Life Sci, Coll Med, Seoul 05505, South KoreaUniv Ulsan, Asan Med Ctr, Dept Radiol, Coll Med, 88,Olymp Ro 43 Gil, Seoul 05505, South Korea
Park, B. W.
Kim, M.
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Univ Ulsan, Asan Med Ctr, Dept Radiol, Coll Med, 88,Olymp Ro 43 Gil, Seoul 05505, South KoreaUniv Ulsan, Asan Med Ctr, Dept Radiol, Coll Med, 88,Olymp Ro 43 Gil, Seoul 05505, South Korea
Kim, M.
Kim, J. K.
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Univ Ulsan, Asan Med Ctr, Dept Radiol, Coll Med, 88,Olymp Ro 43 Gil, Seoul 05505, South KoreaUniv Ulsan, Asan Med Ctr, Dept Radiol, Coll Med, 88,Olymp Ro 43 Gil, Seoul 05505, South Korea
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UCLA, Ronald Reagan Ucla Med Ctr, David Geffen Sch Med, Dept Radiol Sci, 924 Westwood Blvd,Suite 615, Los Angeles, CA 90024 USAUCLA, Ronald Reagan Ucla Med Ctr, David Geffen Sch Med, Dept Radiol Sci, 924 Westwood Blvd,Suite 615, Los Angeles, CA 90024 USA
Coy, Heidi
Hsieh, Kevin
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Hsieh, Kevin
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UCLA, Sch Engn, Dept Bioengn, NRB 635 Charles & Young Dr South Suite 116, Los Angeles, CA 90095 USAUCLA, Ronald Reagan Ucla Med Ctr, David Geffen Sch Med, Dept Radiol Sci, 924 Westwood Blvd,Suite 615, Los Angeles, CA 90024 USA
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Young, Jonathan R.
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City Hope Natl Med Ctr, Dept Radiol, 1500 East Duarte Rd, Duarte, CA 91010 USAUCLA, Ronald Reagan Ucla Med Ctr, David Geffen Sch Med, Dept Radiol Sci, 924 Westwood Blvd,Suite 615, Los Angeles, CA 90024 USA
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UCLA, Ronald Reagan Ucla Med Ctr, David Geffen Sch Med, Dept Radiol Sci, 924 Westwood Blvd,Suite 615, Los Angeles, CA 90024 USAUCLA, Ronald Reagan Ucla Med Ctr, David Geffen Sch Med, Dept Radiol Sci, 924 Westwood Blvd,Suite 615, Los Angeles, CA 90024 USA
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Aquesta Specialized Uropathol, Brisbane, Qld, Australia
Rennes Univ Hosp, Rennes, France
Univ Rennes, Rennes, FranceAquesta Specialized Uropathol, Brisbane, Qld, Australia
Dagher, Julien
Delahunt, Brett
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Aquesta Specialized Uropathol, Brisbane, Qld, Australia
Wellington Sch Med & Hlth Sci, Dept Pathol & Mol Med, Wellington, New ZealandAquesta Specialized Uropathol, Brisbane, Qld, Australia
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Rioux-Leclercq, Nathalie
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Egevad, Lars
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Karolinska Inst, Dept Oncol Pathol, Stockholm, SwedenAquesta Specialized Uropathol, Brisbane, Qld, Australia
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Univ Ulsan, Asan Med Ctr, Dept Radiol, Coll Med, 88,Olymp Ro 43 Gil, Seoul 05505, South KoreaUniv Ulsan, Asan Med Ctr, Dept Radiol, Coll Med, 88,Olymp Ro 43 Gil, Seoul 05505, South Korea
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Kim, M.
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Univ Ulsan, Asan Med Ctr, Dept Radiol, Coll Med, 88,Olymp Ro 43 Gil, Seoul 05505, South KoreaUniv Ulsan, Asan Med Ctr, Dept Radiol, Coll Med, 88,Olymp Ro 43 Gil, Seoul 05505, South Korea
Kim, M.
Kim, J. K.
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Univ Ulsan, Asan Med Ctr, Dept Radiol, Coll Med, 88,Olymp Ro 43 Gil, Seoul 05505, South KoreaUniv Ulsan, Asan Med Ctr, Dept Radiol, Coll Med, 88,Olymp Ro 43 Gil, Seoul 05505, South Korea
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UCLA, Ronald Reagan Ucla Med Ctr, David Geffen Sch Med, Dept Radiol Sci, 924 Westwood Blvd,Suite 615, Los Angeles, CA 90024 USAUCLA, Ronald Reagan Ucla Med Ctr, David Geffen Sch Med, Dept Radiol Sci, 924 Westwood Blvd,Suite 615, Los Angeles, CA 90024 USA
Coy, Heidi
Hsieh, Kevin
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UCLA, Sch Engn, Dept Comp Sci, NRB 635 Charles E Young Dr South Suite 116, Los Angeles, CA 90095 USAUCLA, Ronald Reagan Ucla Med Ctr, David Geffen Sch Med, Dept Radiol Sci, 924 Westwood Blvd,Suite 615, Los Angeles, CA 90024 USA
Hsieh, Kevin
Wu, Willie
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UCLA, Sch Engn, Dept Bioengn, NRB 635 Charles & Young Dr South Suite 116, Los Angeles, CA 90095 USAUCLA, Ronald Reagan Ucla Med Ctr, David Geffen Sch Med, Dept Radiol Sci, 924 Westwood Blvd,Suite 615, Los Angeles, CA 90024 USA
Wu, Willie
Nagarajan, Mahesh B.
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UCLA, Ronald Reagan Ucla Med Ctr, David Geffen Sch Med, Dept Radiol Sci, 924 Westwood Blvd,Suite 615, Los Angeles, CA 90024 USAUCLA, Ronald Reagan Ucla Med Ctr, David Geffen Sch Med, Dept Radiol Sci, 924 Westwood Blvd,Suite 615, Los Angeles, CA 90024 USA
Nagarajan, Mahesh B.
Young, Jonathan R.
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City Hope Natl Med Ctr, Dept Radiol, 1500 East Duarte Rd, Duarte, CA 91010 USAUCLA, Ronald Reagan Ucla Med Ctr, David Geffen Sch Med, Dept Radiol Sci, 924 Westwood Blvd,Suite 615, Los Angeles, CA 90024 USA
Young, Jonathan R.
Douek, Michael L.
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UCLA, Ronald Reagan Ucla Med Ctr, David Geffen Sch Med, Dept Radiol Sci, 924 Westwood Blvd,Suite 615, Los Angeles, CA 90024 USAUCLA, Ronald Reagan Ucla Med Ctr, David Geffen Sch Med, Dept Radiol Sci, 924 Westwood Blvd,Suite 615, Los Angeles, CA 90024 USA
Douek, Michael L.
Brown, Matthew S.
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UCLA, Ronald Reagan Ucla Med Ctr, David Geffen Sch Med, Dept Radiol Sci, 924 Westwood Blvd,Suite 615, Los Angeles, CA 90024 USAUCLA, Ronald Reagan Ucla Med Ctr, David Geffen Sch Med, Dept Radiol Sci, 924 Westwood Blvd,Suite 615, Los Angeles, CA 90024 USA
Brown, Matthew S.
Scalzo, Fabien
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UCLA, Dept Neurol, David Geffen Sch Med, NRB 635 Charles & Young Dr South Suite 116, Los Angeles, CA 90095 USAUCLA, Ronald Reagan Ucla Med Ctr, David Geffen Sch Med, Dept Radiol Sci, 924 Westwood Blvd,Suite 615, Los Angeles, CA 90024 USA
Scalzo, Fabien
Raman, Steven S.
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UCLA, Ronald Reagan Ucla Med Ctr, Dept Radiol Sci, David Geffen Sch Med, 757 Westwood Plaza,RRUMC 1621H,Box 957437, Los Angeles, CA 90095 USAUCLA, Ronald Reagan Ucla Med Ctr, David Geffen Sch Med, Dept Radiol Sci, 924 Westwood Blvd,Suite 615, Los Angeles, CA 90024 USA
机构:
Aquesta Specialized Uropathol, Brisbane, Qld, Australia
Rennes Univ Hosp, Rennes, France
Univ Rennes, Rennes, FranceAquesta Specialized Uropathol, Brisbane, Qld, Australia
Dagher, Julien
Delahunt, Brett
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机构:
Aquesta Specialized Uropathol, Brisbane, Qld, Australia
Wellington Sch Med & Hlth Sci, Dept Pathol & Mol Med, Wellington, New ZealandAquesta Specialized Uropathol, Brisbane, Qld, Australia
Delahunt, Brett
Rioux-Leclercq, Nathalie
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Rennes Univ Hosp, Rennes, France
Univ Rennes, Rennes, FranceAquesta Specialized Uropathol, Brisbane, Qld, Australia
Rioux-Leclercq, Nathalie
Egevad, Lars
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Karolinska Inst, Dept Oncol Pathol, Stockholm, SwedenAquesta Specialized Uropathol, Brisbane, Qld, Australia
Egevad, Lars
Srigley, John R.
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h-index: 0
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Aquesta Specialized Uropathol, Brisbane, Qld, Australia
Univ Toronto, Dept Lab Med & Pathobiol, Toronto, ON, CanadaAquesta Specialized Uropathol, Brisbane, Qld, Australia