Insights into the Bamboo Genome: Syntenic Relationships to Rice and Sorghum

被引：26

作者：

Gui, Yi-Jie ^{[1
,2
]}

Zhou, Yan ^{[3
,5
]}

Wang, Yu ^{[1
,2
]}

Wang, Sheng ^{[4
]}

Wang, Sheng-Yue ^{[5
]}

Hu, Yan ^{[6
]}

Bo, Shi-Ping ^{[1
,2
]}

Chen, Huan ^{[1
,2
]}

Zhou, Chang-Ping ^{[7
]}

Ma, Nai-Xun ^{[8
]}

Zhang, Tian-Zhen ^{[6
]}

Fan, Long-Jiang ^{[1
,2
]}

机构：

[1] Zhejiang Univ, Inst Crop Sci, Hangzhou 310029, Zhejiang, Peoples R China

[2] Zhejiang Univ, Inst Bioinformat, Hangzhou 310029, Zhejiang, Peoples R China

[3] Fudan Univ, State Key Lab Genet Engn, Dept Microbiol, Sch Life Sci, Shanghai 200032, Peoples R China

[4] Hangzhou Dianzi Univ, Hangzhou 310018, Zhejiang, Peoples R China

[5] Chinese Natl Human Genome Ctr Shanghai, MOST Key Lab Hlth & Dis Genom, Shanghai 201203, Peoples R China

[6] Nanjing Agr Univ, Natl Key Lab Crop Genet & Germplasm Enhancement, Nanjing 210095, Peoples R China

[7] Anji Bamboo Exposit Garden, Anji 313300, Peoples R China

[8] Chinese Acad Forestry, Res Inst Subtrop Forestry, Fuyang 311400, Peoples R China

来源：

JOURNAL OF INTEGRATIVE PLANT BIOLOGY | 2010年 / 52卷 / 11期

关键词：

SEQUENCE; DATABASE;

D O I：

10.1111/j.1744-7909.2010.00965.x

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

Bamboo occupies an important phylogenetic node in the grass family and plays a significant role in the forest industry. We produced 1.2 Mb of tetraploid moso bamboo (Phyllostachys pubescens E. Mazel ex H. de Leh.) sequences from 13 bacterial artificial chromosome (BAC) clones, and these are the largest genomic sequences available so far from the subfamily Bambusoideae. The content of repetitive elements (36.2%) in bamboo is similar to that in rice. Both rice and sorghum exhibit high genomic synteny with bamboo, which suggests that rice and sorghum may be useful as models for decoding Bambusoideae genomes.

引用

页码：1008 / 1015

页数：8

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