An immune-related lncRNA model for predicting prognosis, immune landscape and chemotherapeutic response in bladder cancer

被引:7
|
作者
Hou, Jian [2 ]
Liang, Songwu [2 ]
Xie, Zhimin [1 ]
Qu, Genyi [1 ]
Xu, Yong [1 ]
Yang, Guang [1 ]
Tang, Cheng [1 ]
机构
[1] Zhuzhou Cent Hosp, Dept Urol, Zhuzhou 412007, Peoples R China
[2] Univ Hongkong, Dept Surg, Div Urol, Shenzhen Hosp, Shenzhen 518000, Peoples R China
关键词
MIGRATION;
D O I
10.1038/s41598-022-07334-w
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Long noncoding RNAs (lncRNAs) participate in cancer immunity. We characterized the clinical significance of an immune-related lncRNA model and evaluated its association with immune infiltrations and chemosensitivity in bladder cancer. Transcriptome data of bladder cancer specimens were employed from The Cancer Genome Atlas. Dysregulated immune-related lncRNAs were screened via Pearson correlation and differential expression analyses, followed by recognition of lncRNA pairs. Then, a LASSO regression model was constructed, and receiver operator characteristic curves of one-, three- and five-year survival were established. Akaike information criterion (AIC) value of one-year survival was determined as the cutoff of high- and low-risk subgroups. The differences in survival, clinical features, immune cell infiltrations and chemosensitivity were compared between subgroups. Totally, 90 immune-related lncRNA pairs were identified, 15 of which were screened for constructing the prognostic model. The area under the curves of one-, three- and five-year survival were 0.806, 0.825 and 0.828, confirming the favorable predictive performance of this model. According to the AIC value, we clustered patients into high- and low-risk subgroups. High-risk score indicated unfavorable outcomes. The risk model was related to survival status, age, stage and TNM. Compared with conventional clinicopathological characteristics, the risk model displayed higher predictive efficacy and served as an independent predictor. Also, it could well characterize immune cell infiltration landscape and predict immune checkpoint expression and sensitivity to cisplatin and methotrexate. Collectively, the model conducted by paring immune-related lncRNAs regardless of expressions exhibits a favorable efficacy in predicting prognosis, immune landscape and chemotherapeutic response in bladder cancer.
引用
收藏
页数:12
相关论文
共 50 条
  • [1] A Novel Signature Constructed by Immune-Related LncRNA Predicts the Immune Landscape of Colorectal Cancer
    Sun, Mengyu
    Zhang, Tongyue
    Wang, Yijun
    Huang, Wenjie
    Xia, Limin
    FRONTIERS IN GENETICS, 2021, 12
  • [2] Comprehensive Analysis of a Ferroptosis-Related lncRNA Signature for Predicting Prognosis and Immune Landscape in Osteosarcoma
    Zhang, Yiming
    He, Rong
    Lei, Xuan
    Mao, Lianghao
    Yin, Zhengyu
    Zhong, Xinyu
    Cao, Wenbing
    Zheng, Qiping
    Li, Dapeng
    FRONTIERS IN ONCOLOGY, 2022, 12
  • [3] Identification and validation of an immune-related miRNA signature for predicting prognosis of hepatocellular carcinoma
    Hu, Tao
    Gu, Jiarong
    Tan, Lin
    Deng, Haiyan
    Gao, Xianxian
    Yang, Shanru
    Xu, Hao
    Hou, Xin
    Liao, Qi
    Yang, Xiaoping
    INTERNATIONAL IMMUNOPHARMACOLOGY, 2025, 146
  • [4] Using immune-related lncRNAs to construct novel biomarkers and investigate the immune landscape of breast cancer
    Qin, Muping
    Ma, Yanfei
    Wang, Zifan
    Fang, Dalang
    Wei, Jie
    TRANSLATIONAL CANCER RESEARCH, 2021, 10 (06) : 2991 - 3003
  • [5] Identification and validation of an anoikis-related lncRNA signature to predict prognosis and immune landscape in osteosarcoma
    Zhang, Jun-Song
    Pan, Run-Sang
    Tian, Xiao-Bin
    FRONTIERS IN ONCOLOGY, 2023, 13
  • [6] Construction of a Necroptosis-Related lncRNA Signature for Predicting Prognosis and Immune Response in Kidney Renal Clear Cell Carcinoma
    Zhang, Yue
    Zhuang, Tongtian
    Xin, Zhenlong
    Sun, Changjian
    Li, Deyang
    Ma, Nan
    Wang, Xiaoyan
    Wang, Xuning
    CELLS, 2023, 12 (01)
  • [7] Identification of an Iron Metabolism-Related lncRNA Signature for Predicting Osteosarcoma Survival and Immune Landscape
    Shao, Hong-bin
    Yang, Wan-jun
    Dong, Chen-hui
    Yang, Xiao-jie
    Li, Shen-song
    Peng, Zhou
    FRONTIERS IN GENETICS, 2022, 13
  • [8] Identification of a dysregulated CircRNA-associated gene signature for predicting prognosis, immune landscape, and drug candidates in bladder cancer
    Shen, Chong
    Li, Zhi
    Zhang, Yinglang
    Zhang, Zhe
    Wu, Zhouliang
    Da, La
    Yang, Shaobo
    Wang, Zejin
    Zhang, Yu
    Qie, Yunkai
    Zhao, Gangjian
    Lin, Yuda
    Huang, Shiwang
    Zhou, Mingli
    Hu, Hailong
    FRONTIERS IN ONCOLOGY, 2022, 12
  • [9] Identification and validation of basement membrane-related genes predicting prognosis and immune infiltration associated with bladder cancer
    Lai, Fie
    He, Lin
    Lia, Thongher
    Yang, Zhen
    Huang, Chaoyou
    MEDICINE, 2024, 103 (29) : e38858
  • [10] Characterization of sialylation-related long noncoding RNAs to develop a novel signature for predicting prognosis, immune landscape, and chemotherapy response in colorectal cancer
    Zhou, Mingxuan
    Lv, Silin
    Hou, Yufang
    Zhang, Rixin
    Wang, Weiqi
    Yan, Zheng
    Li, Tiegang
    Gan, Wenqiang
    Zeng, Zifan
    Zhang, Fang
    Yang, Min
    FRONTIERS IN IMMUNOLOGY, 2022, 13