Effects of solvent concentration and composition on protein dynamics: 13C MAS NMR studies of elastin in glycerol-water mixtures

被引:7
|
作者
Demuth, Dominik [1 ]
Haase, Nils [1 ]
Malzacher, Daniel [1 ]
Vogel, Michael [1 ]
机构
[1] Tech Univ Darmstadt, Inst Festkorperphys, D-64289 Darmstadt, Germany
来源
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS | 2015年 / 1854卷 / 08期
关键词
13C MAS NMR; Elaslin; Protein dynamics; SOLID-STATE NMR; HYDROGEN-BOND DYNAMICS; MOLECULAR-DYNAMICS; HYDRATION; TEMPERATURE; TRANSITION; STABILIZATION; FLEXIBILITY; RELAXATION; DEPENDENCE;
D O I
10.1016/j.bbapap.2015.04.012
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
We use C-13 CP MAS NMR to investigate the dependence of elastin dynamics on the concentration and composition of the solvent at various temperatures. For elastin in pure glycerol, line-shape analysis shows that largerscale fluctuations of the protein backbone require a minimum glycerol concentration of similar to 0.6 g/g at ambient temperature, while smaller-scale fluctuations are activated at lower solvation levels of similar to 02 g/g. Immersing elastin in various glycerol-water mixtures, we observe at room temperature that the protein mobility is higher for lower glycerol fractions in the solvent and, thus, lower solvent viscosity. When decreasing the temperature, the elastin spectra approach the line shape for the rigid protein at 245 K for all studied samples, indicating that the protein ceases to be mobile on the experimental time scale of similar to 10(-5) s. Our findings yield evidence for a strong coupling between elastin fluctuations and solvent dynamics and, hence, such interaction is not restricted to the case of protein-water mixtures. Spectral resolution of different carbon species reveals that the protein-solvent couplings can, however, be different for side chain and backbone units. We discuss these results against the background of the slaving model for protein dynamics. (C) 2015 Elsevier B.V. All rights reserved.
引用
收藏
页码:995 / 1000
页数:6
相关论文
共 50 条
  • [1] Effect of glycerol-water binary mixtures on the structure and dynamics of protein solutions
    GhattyVenkataKrishna, Pavan K.
    Carri, Gustavo A.
    JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2014, 32 (03) : 424 - 437
  • [2] 13C CP/MAS NMR studies of flavonoids
    Wawer, I
    Zielinska, A
    MAGNETIC RESONANCE IN CHEMISTRY, 2001, 39 (07) : 374 - 380
  • [3] 13C MAS NMR studies of the effects of hydration on the cell walls of potatoes and Chinese water chestnuts
    Tang, HR
    Belton, PS
    Ng, A
    Ryden, P
    JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 1999, 47 (02) : 510 - 517
  • [4] 2H and 13C NMR studies on the temperature-dependent water and protein dynamics in hydrated elastin, myoglobin and collagen
    Lusceac, Sorin A.
    Vogel, Michael R.
    Herbers, Claudia R.
    BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS, 2010, 1804 (01): : 41 - 48
  • [5] NMR Studies of Localized Water and Protein Backbone Dynamics in Mechanically Strained Elastin
    Sun, Cheng
    Mitchell, Odingo
    Huang, Jiaxin
    Boutis, Gregory S.
    JOURNAL OF PHYSICAL CHEMISTRY B, 2011, 115 (47) : 13935 - 13942
  • [6] Molecular dynamics in supercooled glycerol: Results from 13C NMR spectroscopy
    Jain, P.
    Levchenko, A.
    Yu, P.
    Sen, S.
    JOURNAL OF CHEMICAL PHYSICS, 2009, 130 (19)
  • [7] NMR studies of dynamics in RNA and DNA by 13C relaxation
    Shajani, Zahra
    Varani, Gabriele
    BIOPOLYMERS, 2007, 86 (5-6) : 348 - 359
  • [8] 13C CPMAS NMR studies of the elastin-like polypeptide (LGGVG)n
    Kumashiro, KK
    Kurano, TL
    Niemczura, WP
    Martino, M
    Tamburro, AM
    BIOPOLYMERS, 2003, 70 (02) : 221 - 226
  • [9] 13C, 2H NMR Studies of Structural and Dynamical Modifications of Glucose-Exposed Porcine Aortic Elastin
    Silverstein, Moshe C.
    Bilici, kuebra
    Morgan, Steven W.
    Wang, Yunjie
    Zhang, Yanhang
    Boutis, Gregory S.
    BIOPHYSICAL JOURNAL, 2015, 108 (07) : 1758 - 1772
  • [10] CP MAS 13C NMR Spectroscopy in Determination of Species-Specific Differences in Wood Composition
    Kostryukov, S. G.
    Petrov, P. S.
    Masterova, Yu. Yu.
    Idris, T. D.
    Hamdamov, S. S.
    Yunusov, I. A.
    Kostryukov, N. S.
    RUSSIAN JOURNAL OF BIOORGANIC CHEMISTRY, 2022, 48 (07) : 1441 - 1447