A Genome-Wide Association Study Identifies an Osteoarthritis Susceptibility Locus on Chromosome 7q22

被引:162
|
作者
Kerkhof, Hanneke J. M.
Lories, Rik J. [2 ]
Meulenbelt, Ingrid [3 ,4 ]
Jonsdottir, Ingileif [5 ,6 ]
Valdes, Ana M. [7 ]
Arp, Pascal
Ingvarsson, Thorvaldur [6 ,8 ]
Jhamai, Mila
Jonsson, Helgi [6 ,9 ]
Stolk, Lisette [4 ]
Thorleifsson, Gudmar [5 ]
Zhai, Guangju [7 ]
Zhang, Feng [7 ]
Zhu, Yanyan [10 ]
van der Breggen, Ruud [3 ]
Carr, Andrew [11 ]
Doherty, Michael [12 ,13 ]
Doherty, Sally [12 ,13 ]
Felson, David T. [14 ]
Gonzalez, Antonio [15 ]
Halldorsson, Bjarni V. [5 ,16 ]
Hart, Deborah J. [7 ]
Hauksson, Valdimar B. [5 ]
Hofman, Albert [4 ]
Ioannidis, John P. A. [17 ,18 ]
Kloppenburg, Margreet [3 ]
Lane, Nancy E. [19 ,20 ]
Loughlin, John [21 ]
Luyten, Frank P. [2 ]
Nevitt, Michael C. [19 ,20 ]
Parimi, Neeta [22 ]
Pols, Huibert A. P.
Rivadeneira, Fernando [4 ]
Slagboom, Eline P. [3 ,4 ]
Styrkarsdottir, Unnur [5 ]
Tsezou, Aspasia [23 ]
van de Putte, Tom [24 ]
Zmuda, Joseph [25 ]
Spector, Tim D. [7 ]
Stefansson, Kari [5 ,6 ]
Uitterlinden, Andre G. [4 ]
van Meurs, Joyce B. J. [1 ,4 ]
机构
[1] Erasmus MC, Dept Internal Med, Genet Lab, NL-3000 DR Rotterdam, Netherlands
[2] Katholieke Univ Leuven, Louvain, Belgium
[3] Leiden Univ, Med Ctr, Leiden, Netherlands
[4] Sponsored Netherlands Consortium Healthy Aging, Netherlands Genom Initiat, Rotterdam, Netherlands
[5] DeCODE Genet, Reykjavik, Iceland
[6] Univ Iceland, Reykjavik, Iceland
[7] Kings Coll London, London WC2R 2LS, England
[8] Univ Akureyri, Akureyri, Iceland
[9] Landspitali Univ Hosp, Reykjavik, Iceland
[10] Boston Univ, Sch Publ Hlth, Boston, MA USA
[11] Nuffield Orthopaed Ctr, Oxford OX3 7LD, England
[12] Univ Nottingham, Nottingham NG7 2RD, England
[13] City Hosp Nottingham, Nottingham, England
[14] Boston Univ, Sch Med, Boston, MA 02118 USA
[15] Hosp Clin Univ Santiago, Santiago De Compostela, Spain
[16] Reykjavik Univ, Reykjavik, Iceland
[17] Univ Ioannina, Sch Med, GR-45110 Ioannina, Greece
[18] Tufts Univ, Sch Med, Boston, MA 02111 USA
[19] Univ Calif San Francisco, San Francisco, CA 94143 USA
[20] Univ Calif Davis, Sacramento, CA 95817 USA
[21] Newcastle Univ, Newcastle Upon Tyne NE1 7RU, Tyne & Wear, England
[22] Calif Pacific Res Inst, San Francisco, CA USA
[23] Univ Thessaly, Larisa, Greece
[24] TiGenix, Louvain, Belgium
[25] Univ Pittsburgh, Pittsburgh, PA USA
来源
ARTHRITIS AND RHEUMATISM | 2010年 / 62卷 / 02期
基金
英国惠康基金;
关键词
PROTEIN-KINASE-A; RII-BETA-SUBUNIT; KNEE OSTEOARTHRITIS; OSTEOPOROTIC FRACTURES; GENERAL-POPULATION; HAND OSTEOARTHRITIS; RISK; GDF5; HIP; EXPRESSION;
D O I
10.1002/art.27184
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Objective. To identify novel genes involved in osteoarthritis (OA), by means of a genome-wide association study. Methods. We tested 500,510 single-nucleotide polymorphisms (SNPs) in 1,341 Dutch Caucasian OA cases and 3,496 Dutch Caucasian controls. SNPs associated with at least 2 OA phenotypes were analyzed in 14,938 OA cases and similar to 39,000 controls. Meta-analyses were performed using the program Comprehensive Meta-analysis, with P values <1 x 10(-7) considered genome-wide significant. Results. The C allele of rs3815148 on chromosome 7q22 (minor allele frequency 23%; intron 12 of the COG5 gene) was associated with a 1.14-fold increased risk (95% confidence interval 1.09-1.19) of knee and/or hand OA (P = 8 x 10(-8)) and also with a 30% increased risk of knee OA progression (95% confidence interval 1.03-1.64) (P = 0.03). This SNP is in almost complete linkage disequilibrium with rs3757713 (68 kb upstream of GPR22), which is associated with GPR22 expression levels in lymphoblast cell lines (P = 4 x 10(-12)). Immunohistochemistry experiments revealed that G protein coupled receptor protein 22 (GPR22) was absent in normal mouse articular cartilage or synovium. However, GPR22-positive chondrocytes were found in the upper layers of the articular cartilage of mouse knee joints that were challenged with in vivo papain treatment or methylated bovine serum albumin treatment. GPR22-positive chondrocyte-like cells were also found in osteophytes in instability-induced OA. Conclusion. Our findings identify a novel common variant on chromosome 7q22 that influences susceptibility to prevalence and progression of OA. Since the GPR22 gene encodes a G protein-coupled receptor, this is potentially an interesting therapeutic target.
引用
收藏
页码:499 / 510
页数:12
相关论文
共 50 条
  • [1] Meta-analysis of genome-wide association studies confirms a susceptibility locus for knee osteoarthritis on chromosome 7q22
    Evangelou, Evangelos
    Valdes, Ana M.
    Kerkhof, Hanneke J. M.
    Styrkarsdottir, Unnur
    Zhu, YanYan
    Meulenbelt, Ingrid
    Lories, Rik J.
    Karassa, Fotini B.
    Tylzanowski, Przemko
    Bos, Steffan D.
    Akune, Toru
    Arden, Nigel K.
    Carr, Andrew
    Chapman, Kay
    Cupples, L. Adrienne
    Dai, Jin
    Deloukas, Panos
    Doherty, Michael
    Doherty, Sally
    Engstrom, Gunnar
    Gonzalez, Antonio
    Halldorsson, Bjarni V.
    Hammond, Christina L.
    Hart, Deborah J.
    Helgadottir, Hafdis
    Hofman, Albert
    Ikegawa, Shiro
    Ingvarsson, Thorvaldur
    Jiang, Qing
    Jonsson, Helgi
    Kaprio, Jaakko
    Kawaguchi, Hiroshi
    Kisand, Kalle
    Kloppenburg, Margreet
    Kujala, Urho M.
    Lohmander, L. Stefan
    Loughlin, John
    Luyten, Frank P.
    Mabuchi, Akihiko
    McCaskie, Andrew
    Nakajima, Masahiro
    Nilsson, Peter M.
    Nishida, Nao
    Ollier, William E. R.
    Panoutsopoulou, Kalliope
    van de Putte, Tom
    Ralston, Stuart H.
    Rivadeneira, Fernado
    Saarela, Janna
    Schulte-Merker, Stefan
    ANNALS OF THE RHEUMATIC DISEASES, 2011, 70 (02) : 349 - 355
  • [2] Genome-wide scan for schizophrenia in the Finnish population:: evidence for a locus on chromosome 7q22
    Ekelund, J
    Lichtermann, D
    Hovatta, I
    Ellonen, P
    Suvisaari, J
    Terwilliger, JD
    Juvonen, H
    Varilo, T
    Arajärvi, R
    Kokko-Sahin, ML
    Lönnqvist, J
    Peltonen, L
    HUMAN MOLECULAR GENETICS, 2000, 9 (07) : 1049 - 1057
  • [3] A Genome-Wide Association Study In COPD Identifies A Susceptibility Locus On Chromosome 19q13
    Cho, M. H.
    Castaldi, P.
    Hersh, C. P.
    DeMeo, D. L.
    Klanderman, B. J.
    Sylvia, J.
    Ziniti, J.
    Lange, C.
    Litonjua, A. A.
    Sparrow, D.
    Murphy, J.
    Regan, E.
    Make, B. J.
    Hokanson, J. E.
    Murray, T.
    Hetmanski, J.
    Pillai, S.
    Kong, X.
    Anderson, W.
    Tal-Singer, R.
    Lomas, D. A.
    Bakke, P.
    Gulsvik, A.
    Crapo, J. D.
    Beaty, T. H.
    Silverman, E. K.
    AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE, 2011, 183
  • [4] A genome-wide association study of COPD identifies a susceptibility locus on chromosome 19q13
    Cho, Michael H.
    Castaldi, Peter J.
    Wan, Emily S.
    Siedlinski, Mateusz
    Hersh, Craig P.
    Demeo, Dawn L.
    Himes, Blanca E.
    Sylvia, Jody S.
    Klanderman, Barbara J.
    Ziniti, John P.
    Lange, Christoph
    Litonjua, Augusto A.
    Sparrow, David
    Regan, Elizabeth A.
    Make, Barry J.
    Hokanson, John E.
    Murray, Tanda
    Hetmanski, Jacqueline B.
    Pillai, Sreekumar G.
    Kong, Xiangyang
    Anderson, Wayne H.
    Tal-Singer, Ruth
    Lomas, David A.
    Coxson, Harvey O.
    Edwards, Lisa D.
    MacNee, William
    Vestbo, Jorgen
    Yates, Julie C.
    Agusti, Alvar
    Calverley, Peter M. A.
    Celli, Bartolome
    Crim, Courtney
    Rennard, Stephen
    Wouters, Emiel
    Bakke, Per
    Gulsvik, Amund
    Crapo, James D.
    Beaty, Terri H.
    Silverman, Edwin K.
    HUMAN MOLECULAR GENETICS, 2012, 21 (04) : 947 - 957
  • [5] Genome-wide association analyses identifies a susceptibility locus for tuberculosis on chromosome 18q11.2
    Thorsten Thye
    Fredrik O Vannberg
    Sunny H Wong
    Ellis Owusu-Dabo
    Ivy Osei
    John Gyapong
    Giorgio Sirugo
    Fatou Sisay-Joof
    Anthony Enimil
    Margaret A Chinbuah
    Sian Floyd
    David K Warndorff
    Lifted Sichali
    Simon Malema
    Amelia C Crampin
    Bagrey Ngwira
    Yik Y Teo
    Kerrin Small
    Kirk Rockett
    Dominic Kwiatkowski
    Paul E Fine
    Philip C Hill
    Melanie Newport
    Christian Lienhardt
    Richard A Adegbola
    Tumani Corrah
    Andreas Ziegler
    Andrew P Morris
    Christian G Meyer
    Rolf D Horstmann
    Adrian V S Hill
    Nature Genetics, 2010, 42 : 739 - 741
  • [6] Genome-wide association analyses identifies a susceptibility locus for tuberculosis on chromosome 18q11.2
    Thye, Thorsten
    Vannberg, Fredrik O.
    Wong, Sunny H.
    Owusu-Dabo, Ellis
    Osei, Ivy
    Gyapong, John
    Sirugo, Giorgio
    Sisay-Joof, Fatou
    Enimil, Anthony
    Chinbuah, Margaret A.
    Floyd, Sian
    Warndorff, David K.
    Sichali, Lifted
    Malema, Simon
    Crampin, Amelia C.
    Ngwira, Bagrey
    Teo, Yik Y.
    Small, Kerrin
    Rockett, Kirk
    Kwiatkowski, Dominic
    Fine, Paul E.
    Hill, Philip C.
    Newport, Melanie
    Lienhardt, Christian
    Adegbola, Richard A.
    Corrah, Tumani
    Ziegler, Andreas
    Morris, Andrew P.
    Meyer, Christian G.
    Horstmann, Rolf D.
    Hill, Adrian V. S.
    NATURE GENETICS, 2010, 42 (09) : 739 - 741
  • [7] Genome-wide association study for ulcerative colitis identifies risk loci at 7q22 and 22q13 (IL17REL)
    Andre Franke
    Tobias Balschun
    Christian Sina
    David Ellinghaus
    Robert Häsler
    Gabriele Mayr
    Mario Albrecht
    Michael Wittig
    Eva Buchert
    Susanna Nikolaus
    Christian Gieger
    H Erich Wichmann
    Jurgita Sventoraityte
    Limas Kupcinskas
    Clive M Onnie
    Maria Gazouli
    Nicholas P Anagnou
    David Strachan
    Wendy L McArdle
    Christopher G Mathew
    Paul Rutgeerts
    Séverine Vermeire
    Morten H Vatn
    Michael Krawczak
    Philip Rosenstiel
    Tom H Karlsen
    Stefan Schreiber
    Nature Genetics, 2010, 42 : 292 - 294
  • [8] Genome-wide association study for ulcerative colitis identifies risk loci at 7q22 and 22q13 (IL17REL)
    Franke, Andre
    Balschun, Tobias
    Sina, Christian
    Ellinghaus, David
    Haesler, Robert
    Mayr, Gabriele
    Albrecht, Mario
    Wittig, Michael
    Buchert, Eva
    Nikolaus, Susanna
    Gieger, Christian
    Wichmann, H. Erich
    Sventoraityte, Jurgita
    Kupcinskas, Limas
    Onnie, Clive M.
    Gazouli, Maria
    Anagnou, Nicholas P.
    Strachan, David
    McArdle, Wendy L.
    Mathew, Christopher G.
    Rutgeerts, Paul
    Vermeire, Severine
    Vatn, Morten H.
    Krawczak, Michael
    Rosenstiel, Philip
    Karlsen, Tom H.
    Schreiber, Stefan
    NATURE GENETICS, 2010, 42 (04) : 292 - 294
  • [9] Erratum: Genome-wide association analyses identifies a susceptibility locus for tuberculosis on chromosome 18q11.2
    Thorsten Thye
    Fredrik O Vannberg
    Sunny H Wong
    Ellis Owusu-Dabo
    Ivy Osei
    John Gyapong
    Giorgio Sirugo
    Fatou Sisay-Joof
    Anthony Enimil
    Margaret A Chinbuah
    Sian Floyd
    David K Warndorff
    Lifted Sichali
    Simon Malema
    Amelia C Crampin
    Bagrey Ngwira
    Yik Y Teo
    Kerrin Small
    Kirk Rockett
    Dominic Kwiatkowski
    Paul E Fine
    Philip C Hill
    Melanie Newport
    Christian Lienhardt
    Richard A Adegbola
    Tumani Corrah
    Andreas Ziegler
    Andrew P Morris
    Christian G Meyer
    Rolf D Horstmann
    Adrian V S Hill
    Nature Genetics, 2011, 43 : 1040 - 1040
  • [10] Genome-wide association scan identifies a colorectal cancer susceptibility locus on chromosome 8q24
    Brent W Zanke
    Celia MT Greenwood
    Jagadish Rangrej
    Rafal Kustra
    Albert Tenesa
    Susan M Farrington
    James Prendergast
    Sylviane Olschwang
    Theodore Chiang
    Edgar Crowdy
    Vincent Ferretti
    Philippe Laflamme
    Saravanan Sundararajan
    Stéphanie Roumy
    Jean-François Olivier
    Frédérick Robidoux
    Robert Sladek
    Alexandre Montpetit
    Peter Campbell
    Stephane Bezieau
    Anne Marie O'Shea
    George Zogopoulos
    Michelle Cotterchio
    Polly Newcomb
    John McLaughlin
    Ban Younghusband
    Roger Green
    Jane Green
    Mary E M Porteous
    Harry Campbell
    Helene Blanche
    Mourad Sahbatou
    Emmanuel Tubacher
    Catherine Bonaiti-Pellié
    Bruno Buecher
    Elio Riboli
    Sebastien Kury
    Stephen J Chanock
    John Potter
    Gilles Thomas
    Steven Gallinger
    Thomas J Hudson
    Malcolm G Dunlop
    Nature Genetics, 2007, 39 : 989 - 994