Computational measurement of tumor immune microenvironment in gastric adenocarcinomas

被引:11
|
作者
Chang, Young Hwan [1 ,2 ]
Heo, You Jeong [3 ]
Cho, Junhun [4 ]
Song, Sang Yong [4 ]
Lee, Jeeyun [5 ]
Kim, Kyoung-Mee [4 ]
机构
[1] Oregon Hlth & Sci Univ, Dept Biomed Engn, Portland, OR 97239 USA
[2] Oregon Hlth & Sci Univ, Computat Biol Program, Portland, OR 97239 USA
[3] Sungkyunkwan Univ, SAIHST, Samsung Med Ctr, Sch Med, Seoul, South Korea
[4] Sungkyunkwan Univ, Dept Pathol & Translat Genom, Samsung Med Ctr, Sch Med, Seoul, South Korea
[5] Sungkyunkwan Univ, Div Hematol Oncol, Dept Med, Samsung Med Ctr,Sch Med, Seoul, South Korea
来源
SCIENTIFIC REPORTS | 2018年 / 8卷
关键词
IMAGE-ANALYSIS; EXPRESSION; PD-L1;
D O I
10.1038/s41598-018-32299-0
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The use of four groups of tumor immune microenvironments (TME) based on PD-L1 and tumor-infiltrating T lymphocytes (TIL) is a reliable biomarker for anti-PD-1/PD-L1 inhibitor therapy. We classified the TME in 241 gastric cancers which were subdivided according to 40 EBV+, 76 microsatellite instability-high (MSI-H), and 125 EBV-/microsatellite-stable (MSS) subtypes by quantitative image analysis (QIA) and correlated the results with mRNA expression levels. The mean PD-L1 ratio and CD8 ratio in EBV+, MSI-H, and EBV-/MSS GCs were significantly different (P < 0.006). The PD-L1 ratio and CD8 ratio obtained by QIA correlated well with the RNA levels of PD-L1 (r = 0.63) and CD8 (r = 0.67), respectively. The TME were type I (PD-L1(H)/CD8(H)) in 45, type II (PD-L1(L)/CD8(L)) in 106, type III (PD-L1(H)/CD8(L)) in 8, and type IV (PD-L1(L)/CD8(H)) in 82 cases. The type I TME was significantly associated with high TIL (P = 3.0E-11) and EBV+status (P = 8.55E-08). In conclusion, QIA results correlated well with the mRNA expression levels and classified TME of gastric cancers.
引用
收藏
页数:8
相关论文
共 50 条
  • [31] Organoid Modeling of the Tumor Immune Microenvironment
    Neal, James T.
    Li, Xingnan
    Zhu, Junjie
    Giangarra, Valeria
    Grzeskowiak, Caitlin L.
    Ju, Jihang
    Liu, Iris H.
    Chiou, Shin-Heng
    Salahudeen, Ameen A.
    Smith, Amber R.
    Deutsch, Brian C.
    Liao, Lillian
    Zemek, Allison J.
    Zhao, Fan
    Karlsson, Kasper
    Schultz, Liora M.
    Metzner, Thomas J.
    Nadauld, Lincoln D.
    Tseng, Yuen-Yi
    Alkhairy, Sahar
    Oh, Coyin
    Keskula, Paula
    Mendoza-Villanueva, Daniel
    De La Vega, Francisco M.
    Kunz, Pamela L.
    Liao, Joseph C.
    Leppert, John T.
    Sunwoo, John B.
    Sabatti, Chiara
    Boehm, Jesse S.
    Hahn, William C.
    Zheng, Grace X. Y.
    Davis, Mark M.
    Kuo, Calvin J.
    CELL, 2018, 175 (07) : 1972 - +
  • [32] The Tumor Microenvironment Reprograms Immune Cells
    Cao, Handi
    Gao, Sanxing
    Jogani, Ritika
    Sugimura, Ryohichi
    CELLULAR REPROGRAMMING, 2022, 24 (06) : 343 - 352
  • [33] Extracellular vesicles in the tumor immune microenvironment
    Hou, Pei-pei
    Chen, Hang-zi
    CANCER LETTERS, 2021, 516 : 48 - 56
  • [34] Immunotherapy: Reshape the Tumor Immune Microenvironment
    Lv, Bingzhe
    Wang, Yunpeng
    Ma, Dongjiang
    Cheng, Wei
    Liu, Jie
    Yong, Tao
    Chen, Hao
    Wang, Chen
    FRONTIERS IN IMMUNOLOGY, 2022, 13
  • [35] Immune Priming of the Tumor Microenvironment by Radiation
    Jiang, Wen
    Chan, Charles K.
    Weissman, Irving L.
    Kim, Betty Y. S.
    Hahn, Stephen M.
    TRENDS IN CANCER, 2016, 2 (11): : 638 - 645
  • [36] Prognostic significance of tumor immune microenvironment and immunotherapy: Novel insights and future perspectives in gastric cancer
    Lazar, Daniela Cornelia
    Avram, Mihaela Flavia
    Romoan, Ioan
    Cornianu, Marioara
    Taban, Sorina
    Goldis, Adrian
    WORLD JOURNAL OF GASTROENTEROLOGY, 2018, 24 (32) : 3583 - 3616
  • [37] The Immune Microenvironment in Gastric Cancer: Prognostic Prediction
    Ma, Mingwei
    Sun, Juan
    Liu, Zhen
    Ouyang, Siwen
    Zhang, Zimu
    Zeng, Ziyang
    Li, Jie
    Kang, Weiming
    FRONTIERS IN ONCOLOGY, 2022, 12
  • [38] Stromal score as a prognostic factor in primary gastric cancer and close association with tumor immune microenvironment
    Mao, Min
    Yu, Qingliang
    Huang, Rongzhi
    Lu, Yunxin
    Wang, Zhen
    Liao, Liang
    CANCER MEDICINE, 2020, 9 (14): : 4980 - 4990
  • [39] The role of tumor immune microenvironment in chordoma: promising immunotherapy strategies
    Xu, Jiuhui
    Shi, Qianyu
    Wang, Boyang
    Ji, Tao
    Guo, Wei
    Ren, Tingting
    Tang, Xiaodong
    FRONTIERS IN IMMUNOLOGY, 2023, 14
  • [40] The tumor immune microenvironment of SCLC is not associated with its molecular subtypes
    Velut, Yoan
    Arque, Basilia
    Wislez, Marie
    Blons, Helene
    Burroni, Barbara
    Prieto, Mathilde
    Beau, Simeon
    Fournel, Ludovic
    Birsen, Gary
    Cremer, Isabelle
    Alifano, Marco
    Damotte, Diane
    Mansuet-Lupo, Audrey
    EUROPEAN JOURNAL OF CANCER, 2024, 212