Quantum Chemical Modeling of Cycloaddition Reaction in a Self-Assembled Capsule

被引:32
|
作者
Daver, Henrik [1 ]
Harvey, Jeremy N. [2 ]
Rebek, Julius, Jr. [3 ,4 ,5 ]
Himo, Fahmi [1 ]
机构
[1] Stockholm Univ, Arrhenius Lab, Dept Organ Chem, SE-10691 Stockholm, Sweden
[2] Katholieke Univ Leuven, Dept Chem, Celestijnenlaan 200F, B-3001 Heverlee, Belgium
[3] Scripps Res Inst, Skaggs Inst Chem Biol, 10550 North Torrey Pines Rd, La Jolla, CA 92037 USA
[4] Scripps Res Inst, Dept Chem, 10550 North Torrey Pines Rd, La Jolla, CA 92037 USA
[5] Shanghai Univ, Ctr Supramol Chem & Catalysis, Shanghai 200444, Peoples R China
基金
美国国家科学基金会; 瑞典研究理事会;
关键词
DIELS-ALDER REACTIONS; ZETA VALENCE QUALITY; MOLECULAR RECOGNITION; BETA-CYCLODEXTRIN; BASIS-SETS; CATALYSIS; ENERGIES; BINDING; APPROXIMATION; MECHANISM;
D O I
10.1021/jacs.7b09102
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Dispersion-corrected density functional theory is used to study the cycloaddition reaction between phenyl acetylene and phenyl azide inside a synthetic, self-assembled capsule. The capsule is first characterized computationally and a previously unrecognized structure is identified as being the most stable. Next, an examination of the free energies of host-guest complexes is conducted, considering all possible reagent, solvent, and solvent impurity combinations as guests. The experimentally observed relative stabilities of host-guest complexes are quite well reproduced, when the experimental concentrations are taken into account. Experimentally, the presence of the host capsule has been shown to accelerate the cycloaddition reaction and to yield exclusively the 1,4-regioisomer product. Both these observations are reproduced by the calculations. A detailed energy decomposition analysis shows that reduction of the entropic cost of bringing together the reactants along with a geometric destabilization of the reactant supercomplex are the major contributors to the rate acceleration compared to the background reaction. Finally, a sensitivity analysis is conducted to assess the stability of the results with respect to the choice of methodology.
引用
收藏
页码:15494 / 15503
页数:10
相关论文
共 50 条
  • [31] Self-assembled monolayers for chemical sensors: Molecular recognition by immobilized supramolecular structures
    Rickert, J
    Weiss, T
    Gopel, W
    SENSORS AND ACTUATORS B-CHEMICAL, 1996, 31 (1-2) : 45 - 50
  • [32] A Self-Assembled Sensor for Carbohydrates on the Surface of Cyclodextrin Vesicles
    Himmelein, Sabine
    Ravoo, Bart Jan
    CHEMISTRY-A EUROPEAN JOURNAL, 2017, 23 (25) : 6034 - 6041
  • [33] Substrate selective amide coupling driven by encapsulation of a coupling agent within a self-assembled hexameric capsule
    Giust, Sonia
    La Sorella, Giorgio
    Sperni, Laura
    Strukul, Giorgio
    Scarso, Alessandro
    CHEMICAL COMMUNICATIONS, 2015, 51 (09) : 1658 - 1661
  • [34] Supramolecular chemical reactors Towards the application of self-assembled polymersomes in cascade reactions
    Brauch, Sebastian
    Wang, Zhipeng
    Van Oers, Matthijs C. M.
    Van Hest, Jan C. M.
    Rutjes, Floris P. J. T.
    CHIMICA OGGI-CHEMISTRY TODAY, 2014, 32 (03) : 73 - 77
  • [35] Encapsulation Studies of Cationic Gold Complexes within a Self-Assembled Hexameric Resorcin[4]arene Capsule
    Adriaenssens, Louis
    Escribano-Cuesta, Ana
    Homs, Anna
    Echavarren, Antonio M.
    Ballester, Pablo
    EUROPEAN JOURNAL OF ORGANIC CHEMISTRY, 2013, 2013 (08) : 1494 - 1500
  • [36] Concerted cycloaddition reactions: a study using the parabolic model and quantum chemical modeling
    Pokidova, T. S.
    Emel'yanova, N. S.
    RUSSIAN CHEMICAL BULLETIN, 2018, 67 (09) : 1558 - 1566
  • [37] Stoichiometric Control of Guest Recognition of Self-Assembled Palladium(II)-Based Supramolecular Architectures
    Algar, Jess L.
    Phillips, James E.
    Evans, Jack D.
    Preston, Dan
    CHEMISTRY-AN ASIAN JOURNAL, 2023, 18 (20)
  • [38] Self-assembled cyclodextrin aggregates and nanoparticles
    Messner, Martin
    Kurkov, Sergey V.
    Jansook, Phatsawee
    Loftsson, Thorsteinn
    INTERNATIONAL JOURNAL OF PHARMACEUTICS, 2010, 387 (1-2) : 199 - 208
  • [39] Self-Assembled Vesicles with Functionalized Membranes
    Gruber, Benjamin
    Koenig, Burkhard
    CHEMISTRY-A EUROPEAN JOURNAL, 2013, 19 (02) : 438 - 448
  • [40] Synchronization of optically self-assembled nanorotors
    Cui, Ximin
    Mylnikov, Vasilii
    Johansson, Peter
    Kall, Mikael
    SCIENCE ADVANCES, 2024, 10 (10)