An exact theory of histone-DNA adsorption and wrapping

被引:16
作者
Chou, T [1 ]
机构
[1] Univ Calif Los Angeles, Dept Biomath, Los Angeles, CA 90095 USA
[2] Univ Calif Los Angeles, IPAM, Los Angeles, CA 90095 USA
来源
EUROPHYSICS LETTERS | 2003年 / 62卷 / 05期
基金
美国国家科学基金会;
关键词
D O I
10.1209/epl/i2003-00437-y
中图分类号
O4 [物理学];
学科分类号
0702 ;
摘要
We find exact solutions to a one-dimensional (1D) interacting particle theory and apply the results to the adsorption and wrapping of polymers ( such as DNA) around protein particles ( such as histones). Each adsorbed protein is represented by a Tonks gas particle. The length of each particle is a degree of freedom that represents the degree of DNA wrapping around each histone. Thermodynamic quantities are computed as functions of wrapping energy, adsorbed histone density, and bulk histone concentration ( or chemical potential); their experimental signatures are also discussed. Histone density is found to undergo a two-stage adsorption process as a function of chemical potential, while the mean coverage by high affinity proteins exhibits a maximum as a function of the chemical potential. However, fluctuations in the coverage are concurrently maximal. Histone-histone correlation functions are also computed and exhibit rich two - length- scale behavior.
引用
收藏
页码:753 / 759
页数:7
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