Characterization of the complete chloroplast genome of Cornus bretschneideri (cornaceae)

被引：2
|
作者：
Li, Xiaojuan [1 ,2 ]
Ma, Qian [1 ,2 ]
Zhou, Huakun [3 ,4 ]
Yang, Yongsheng [3 ,4 ]
Li, Huimei [1 ,2 ]
Wang, Jiuli [1 ,2 ]
机构：
[1] Qinghai Nationalities Univ, Key Lab Biotechnol & Anal & Test Qinghai Tibet Pl, Xining, Qinghai, Peoples R China
[2] Qinghai Nationalities Univ, State Ethn Affairs Commiss, Key Lab Resource Chem & Ecoenvironm Protect Tibet, Xining, Qinghai, Peoples R China
[3] Chinese Acad Sci, Northwest Inst Plateau Biol, Key Lab Restorat Ecol Cold Reg Qinghai Prov, Xining, Qinghai, Peoples R China
[4] Chinese Acad Sci, Northwest Inst Plateau Biol, Key Lab Adaptat & Evolut Plateau Biota, Xining, Qinghai, Peoples R China
来源：
MITOCHONDRIAL DNA PART B-RESOURCES | 2020年 / 5卷 / 01期
关键词：
Cornus bretschneideri; chloroplast genome; Cornaceae; phylogenetic tree;
D O I：
10.1080/23802359.2019.1710281
中图分类号：
Q3 [遗传学];
学科分类号：
071007 ; 090102 ;
摘要：
Cornus bretschneideri L.Henry (Cornaceae), a shrub or small tree, is a potential horticultural plant or a soil-fixing plant. In this study, the complete sequence and characterization of the chloroplast genome of C. bretschneideri was studied. The size of the chloroplast genome is 158,270 bp in length, including a large single copy region (LSC) of 87,466 bp, a small single copy region (SSC) of 18,730 bp, and a pair of inverted repeat (IR) regions with 26,037 bp. The GC content of the chloroplast genome was 37.86%. Moreover, a total of 132 functional genes were annotated, including 87 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The neighbor-joining phylogenetic tree suggested that C. bretschneideri was closely related to C. sanguinea and C. macrophylla.
引用
收藏
页码：543 / 544
页数：2
相关论文
共 50 条
  • [1] The complete chloroplast genome sequences of Cornus elliptica (Cornaceae)
    Lu, Hui
    Tang, Jun
    Li, Diqiang
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (03): : 931 - 932
  • [2] The complete chloroplast genome sequence of Cornus sunhangii (Cornaceae)
    Lv, Zhen-Yu
    Huang, Xian-Han
    Luo, Jian
    Zhang, Xu
    Deng, Tao
    Li, Zhi-Min
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3242 - 3243
  • [3] The complete chloroplast genome sequence of Cornus Alba L. (Cornaceae)
    Yuan, Wangjun
    He, Sheqi
    Zhang, Suping
    Chang, Dongwen
    He, Yanxia
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (07): : 1997 - 1998
  • [4] Characteristics and phylogenetic analysis of the complete chloroplast genome of Cornus hongkongensis Hemsl. 1888 (Cornaceae)
    Liu, Ze
    He, Liping
    Cui, Xiaorui
    Zhou, Yong
    He, Wenxia
    Li, Yong
    Chen, Haimei
    Wang, Junjie
    MITOCHONDRIAL DNA PART B-RESOURCES, 2024, 9 (05): : 672 - 677
  • [5] Comparative and phylogenetic analyses based on the complete chloroplast genome of Cornus subg. Syncarpea (Cornaceae) species
    Guan, Bicai
    Wen, Jianteng
    Guo, Hanjing
    Liu, Yizhen
    FRONTIERS IN PLANT SCIENCE, 2024, 15
  • [6] The complete chloroplast genome of Crataegus bretschneideri Schneid. (Rosaceae)
    Zheng, Shuqi
    Song, Han
    Dong, Ningguang
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (12): : 3322 - 3324
  • [7] ISOLATION AND CHARACTERIZATION OF MICROSATELLITE LOCI FOR CORNUS SANGUINEA (CORNACEAE)
    Wadl, Phillip A.
    Hatmaker, E. Anne
    Fussi, Barbara
    Scheffler, Brian E.
    Trigiano, Robert N.
    APPLICATIONS IN PLANT SCIENCES, 2013, 1 (09):
  • [8] ANTHOCYANINS OF CORNACEAE, CORNUS-CANADENSIS
    DU, CT
    WANG, PL
    FRANCIS, FJ
    PHYTOCHEMISTRY, 1974, 13 (09) : 2002 - 2002
  • [9] Characterization of the complete chloroplast genome of Allium kingdonii
    Yang, Xin
    Xie, Deng-Feng
    Zhou, Song-Dong
    He, Xing-Jin
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 868 - 869
  • [10] Characterization of the complete chloroplast genome of Elymus dahuricus
    Xia, Mingze
    Liu, Ruijuan
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (02): : 1512 - 1513
12345