NMR Studies of the Stability, Protonation States, and Tautomerism of 13C- and 15N-Labeled Aldimines of the Coenzyme Pyridoxal 5′-Phosphate in Water

被引:35
作者
Chan-Huot, Monique [1 ]
Sharif, Shasad [1 ]
Tolstoy, Peter M. [1 ]
Toney, Michael D. [2 ]
Limbach, Hans-Heinrich [1 ]
机构
[1] Free Univ Berlin, Inst Chem & Biochem, D-14195 Berlin, Germany
[2] Univ Calif Davis, Dept Chem, Davis, CA 95616 USA
关键词
NUCLEAR-MAGNETIC-RESONANCE; HENDERSON-HASSELBALCH EQUATION; GEMINAL DIAMINE FORMATION; SCHIFF-BASES; AMINO-ACIDS; AQUEOUS-SOLUTION; HYDROGEN-BONDS; GLUTAMATE-DECARBOXYLASE; CARBINOLAMINE FORMATION; TRANSAMINATION REACTION;
D O I
10.1021/bi101061m
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
We have measured the pH-dependent H-1, C-13, and N-15 NMR spectra of pyridoxal 5'-phosphate (C-13(2)-PLP) mixed with equal amounts of either doubly N-15-labeled diaminopropane, N-15(alpha)-labeled. L-lysine, or N-15(epsilon)-labeled L-lysine as model systems for various intermediates of the transimination reaction in PLP-dependent enzymes. At low pH, only the hydrate and aldehyde forms of PLP and the free protonated diamines are present. Above pH 4, the formation of single- and double-headed aldimines (Schiff bases) with the added diamines is observed, and their C-13 and N-15 NMR parameters have been characterized. For 1:1 mixtures the single-headed aldimines dominate. In a similar way, the NMR parameters of the geminal diamine formed with diaminopropane at high pH are measured. However, no geminal diamine is formed with L-lysine. In contrast to the aldimine formed with the epsilon-amino group of lysine, the aldimine formed with the alpha-amino group is unstable at moderately high pH but dominates slightly below pH 10. By analyzing the NMR data, both the mole fractions of the different PLP species and up to 6 different protonation states including their pK(a) values were obtained. Furthermore, the data show that all Schiff bases are subject to a proton tautomerism along the intramolecular OHN hydrogen bond, where the zwitterionic form is favored before deprotonation occurs at high pH. This observation, as well as the observation that around pH 7 the different PLP species are present in comparable amounts, sheds new light on the mechanism of the transimination reaction.
引用
收藏
页码:10818 / 10830
页数:13
相关论文
共 45 条
[21]   EQUILIBRIA AND ABSORPTION-SPECTRA OF SCHIFF-BASES [J].
METZLER, CM ;
CAHILL, A ;
METZLER, DE .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1980, 102 (19) :6075-6082
[22]   EQUILIBRIA BETWEEN PYRIDOXAL AND AMINO ACIDS AND THEIR IMINES [J].
METZLER, DE .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1957, 79 (02) :485-490
[23]   N-15 NMR-STUDIES OF AMINO-ACIDS AND THEIR REACTION-PRODUCTS WITH FORMALDEHYDE [J].
NAULET, N ;
TOME, D ;
MARTIN, GJ .
ORGANIC MAGNETIC RESONANCE, 1983, 21 (09) :564-566
[24]  
OLEARY MH, 1976, J BIOL CHEM, V251, P2248
[25]   PREPARATION OF CRYSTALLINE PHOSPHORYLATED DERIVATIVES OF VITAMIN-B6 [J].
PETERSON, EA ;
SOBER, HA .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1954, 76 (01) :169-175
[26]   The Henderson-Hasselbalch equation: Its history and limitations [J].
Po, HN ;
Senozan, NM .
JOURNAL OF CHEMICAL EDUCATION, 2001, 78 (11) :1499-1503
[27]   SCHIFF-BASES AND GEMINAL DIAMINES DERIVED FROM PYRIDOXAL 5'-PHOSPHATE AND DIAMINES [J].
ROBITAILLE, PM ;
SCOTT, RD ;
WANG, JY ;
METZLER, DE .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1989, 111 (08) :3034-3040
[28]   DETECTION AND IDENTIFICATION OF TRANSIENT INTERMEDIATES IN THE REACTIONS OF TRYPTOPHAN SYNTHASE WITH OXINDOLYL-L-ALANINE AND 2,3-DIHYDRO-L-TRYPTOPHAN - EVIDENCE FOR A TETRAHEDRAL (GEM-DIAMINE) INTERMEDIATE [J].
ROY, M ;
MILES, EW ;
PHILLIPS, RS ;
DUNN, MF .
BIOCHEMISTRY, 1988, 27 (23) :8661-8669
[29]   Density functional theory studies on transimination of vitamin B6 analogues through geminal diamine formation [J].
Salvá, A ;
Donoso, J ;
Frau, J ;
Muñoz, F .
JOURNAL OF PHYSICAL CHEMISTRY A, 2004, 108 (52) :11709-11714
[30]   DYNAMIC NMR-STUDY OF THE TAUTOMERISM OF BICYCLIC OXALAMIDINES - KINETIC HH/HD/DD ISOTOPE AND SOLVENT EFFECTS [J].
SCHERER, G ;
LIMBACH, HH .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1994, 116 (04) :1230-1239