Synthesis, characterization, DNA-binding and spectral properties of complexes [Ru(L)4(dppz)]2+ (L = Im and MeIm)

被引:123
作者
Chen, Lan-Mei [1 ]
Liu, Jie [1 ]
Chen, Jin-Can [1 ]
Tan, Cai-Ping [1 ]
Shi, Shuo [1 ]
Zheng, Kang-Cheng [1 ]
Ji, Liang-Nian [1 ,2 ]
机构
[1] Sun Yat Sen Univ, Sch Chem & Chem Engn, Minist Educ, Key Lab Bioinorgan & Synth Chem, Guangzhou 510275, Peoples R China
[2] Tongji Univ, Dept Chem, Shanghai 200092, Peoples R China
基金
中国国家自然科学基金; 高等学校博士学科点专项科研基金;
关键词
Ru(II) complex; imidazole; DNA-binding; spectral property; DFT/TDDFT;
D O I
10.1016/j.jinorgbio.2007.09.006
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Two new Ru(II) complexes [Ru(L)(4)(dppz)](2+) (L = imidazole (Im), 1-methylimidazole (MeIm); dppz = dipyrido[3,2-a:2',3'-c]phenazine), have been synthesized and characterized in detail by elemental analysis, H-1 NMR, Electrospray ionization mass spectrometry (ESI-MS) and UV-visible (UV-Vis) spectroscopic techniques. The interaction of these complexes with calf thymus DNA (CT-DNA) has been explored by using electronic absorption titration, competitive binding experiment, circular dichroism (CD), thermal denaturation and viscosity measurements. The experimental results show that: both the two complexes can bind to DNA in an intercalation mode; the DNA-binding affinity of complex [Ru(Im)(4)(dppz)](2+) 1 (K-b=2.5 x 10(6) M-1) is greater than that of complex [Ru(MeIM)(4)(dppz)](2+) 2 (K-b = 1.1 x 10(6) M-1). Moreover, it is very interesting to find that the circular dichroic spectrum of DNA-complex 1 adduct, in which both bands centered at 277 nm and 236 nm are all negative, is very different from those of DNA-complex 2 adduct and other Ru(II) complexes binding to DNA in general intercalation mode. It may be due to the hydrogen-bonding effect or the contribution of induced CD signals of complex 1. Another interesting finding is that the hypochromism of the complexes is not linear relation to their DNA-binding affinities. In order to deeply study these experimental phenomena and trends, the density functional theory (DFT) and time-dependent DFT (TDDFT) computations were carried out, and on the basis of the DFT/TDDFT results and the frontier molecular orbital theory, the trend in DNA-binding affinities, the spectral properties as well as the interesting phenomena of larger extent of hypochromism but relatively smaller K-b values for the title complexes have been reasonably explained. (c) 2007 Elsevier Inc. All rights reserved.
引用
收藏
页码:330 / 341
页数:12
相关论文
共 73 条
[1]   Ruthenium(II) complexes of 6,7-dicyanodipyridoquinoxaline: Synthesis, luminescence studies, and DNA interaction [J].
Ambroise, A ;
Maiya, BG .
INORGANIC CHEMISTRY, 2000, 39 (19) :4264-4272
[2]   Cleavage of double-strand DNA by linear and triangular trinuclear copper complexes [J].
an, Y. An ;
Liu, Si-Dong ;
Deng, Shu-Yi ;
Ji, Liang-Nian ;
Mao, Zong-Wan .
JOURNAL OF INORGANIC BIOCHEMISTRY, 2006, 100 (10) :1586-1593
[3]   INCORPORATION OF SOLVENT EFFECTS INTO DENSITY-FUNCTIONAL CALCULATIONS OF MOLECULAR-ENERGIES AND GEOMETRIES [J].
ANDZELM, J ;
KOLMEL, C ;
KLAMT, A .
JOURNAL OF CHEMICAL PHYSICS, 1995, 103 (21) :9312-9320
[4]   QUENCHING OF DNA-ETHIDIUM FLUORESCENCE BY AMSACRINE AND OTHER ANTITUMOR AGENTS - A POSSIBLE ELECTRON-TRANSFER EFFECT [J].
BAGULEY, BC ;
LEBRET, M .
BIOCHEMISTRY, 1984, 23 (05) :937-943
[5]   Efficient DNA alkylation by a pyrrole-imidazole CBI conjugate with an indole linker: Sequence-specific alkylation with nine-base-pair recognition [J].
Bando, Toshikazu ;
Sasaki, Shunta ;
Minoshima, Masafumi ;
Dohno, Chikara ;
Shinohara, Ken-ichi ;
Narita, Akihiko ;
Sugiyama, Hiroshi .
BIOCONJUGATE CHEMISTRY, 2006, 17 (03) :715-720
[6]   Quantum calculation of molecular energies and energy gradients in solution by a conductor solvent model [J].
Barone, V ;
Cossi, M .
JOURNAL OF PHYSICAL CHEMISTRY A, 1998, 102 (11) :1995-2001
[7]   METALS AND DNA - MOLECULAR LEFT-HANDED COMPLEMENTS [J].
BARTON, JK .
SCIENCE, 1986, 233 (4765) :727-734
[8]   TRIS(PHENANTHROLINE)RUTHENIUM(II) - STEREOSELECTIVITY IN BINDING TO DNA [J].
BARTON, JK ;
DANISHEFSKY, AT ;
GOLDBERG, JM .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1984, 106 (07) :2172-2176
[9]   Synthesis and immunosuppressive activity of ruthenium complexes [J].
Bastos, CM ;
Gordon, KA ;
Ocain, TD .
BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 1998, 8 (02) :147-150
[10]   DENSITY-FUNCTIONAL THERMOCHEMISTRY .3. THE ROLE OF EXACT EXCHANGE [J].
BECKE, AD .
JOURNAL OF CHEMICAL PHYSICS, 1993, 98 (07) :5648-5652