Bioinformatics Analysis of Expression Profiles and Prognostic Values of the Signal Transducer and Activator of Transcription Family Genes in Glioma

被引:11
|
作者
Ji, Wei [1 ,2 ]
Liu, Yuankun [1 ]
Xu, Bin [1 ]
Mei, Jie [1 ]
Cheng, Chao [1 ]
Xiao, Yong [2 ]
Yang, Kun [2 ]
Huang, Weiyi [1 ]
Jiao, Jiantong [1 ]
Liu, Hongyi [2 ]
Shao, Junfei [1 ]
机构
[1] Nanjing Med Univ, Wuxi Peoples Hosp, Dept Neurosurg, Wuxi, Jiangsu, Peoples R China
[2] Nanjing Med Univ, Nanjing Brain Hosp, Dept Neurosurg, Nanjing, Peoples R China
基金
中国国家自然科学基金;
关键词
glioma; signal transducer and activator of transcription; prognosis; The Cancer Genome Atlas; Chinese Glioma Genome Atlas; CELL-PROLIFERATION; IFN-GAMMA; CANCER; GLIOBLASTOMA; STAT3; INVASION; SURVIVAL; INFLAMMATION; TEMOZOLOMIDE; PROGRESSION;
D O I
10.3389/fgene.2021.625234
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Signal transducer and activator of transcription (STAT) family genes-of which there are seven members: STAT1, STAT2, STAT3, STAT4, STAT5A, STAT5B, and STAT6-have been associated with the progression of multiple cancers. However, their prognostic values in glioma remain unclear. In this study, we systematically investigated the expression, the prognostic value, and the potential mechanism of the STAT family genes in glioma. The expression of STAT1/2/3/5A/6 members were significantly higher and positively correlated with IDH mutations, while the expression of STAT5B was lower and negatively correlated with IDH mutations in glioma. Survival analysis indicated that the upregulation of STAT1/2/3/5A/6 and downregulation of STAT5B expression was associated with poorer overall survival in glioma. Joint effects analysis of STAT1/2/3/5A/5B/6 expression suggested that the prognostic value of the group was more significant than that of each individual gene. Thus, we constructed a risk score model to predict the prognosis of glioma. The receiver operating characteristic curve and calibration curves showed good performance as prognostic indicators in both TCGA (The Cancer Genome Atlas) and the CGGA (Chinese Glioma Genome Atlas) databases. Furthermore, we analyzed the correlation between STAT expression with immune infiltration in glioma. The Protein-protein interaction network and enrichment analysis showed that STAT members and co-expressed genes mainly participated in signal transduction activity, Hepatitis B, the Jak-STAT signaling pathway, transcription factor activity, sequence-specific DNA binding, and the cytokine-mediated signaling pathway in glioma. In summary, our study analyzed the expression, prognostic values, and biological roles of the STAT gene family members in glioma, based on which we developed a new risk score model to predict the prognosis of glioma more precisely.
引用
收藏
页数:15
相关论文
共 50 条
  • [1] Mutations in the signal transducer and activator of transcription family of genes in cancer
    Shahmarvand, Nahid
    Nagy, Alexandra
    Shahryari, Jahanbanoo
    Ohgami, Robert S.
    CANCER SCIENCE, 2018, 109 (04): : 926 - 933
  • [2] Comprehensive analysis of the expression levels and prognostic values of PRDX family genes in glioma
    Szeliga, Monika
    NEUROCHEMISTRY INTERNATIONAL, 2022, 153
  • [3] Signal transducer and activator of transcription family is a prognostic marker associated with immune infiltration in endometrial cancer
    Zhou, Xin-Ying
    Dai, Hai-Yan
    Zhang, Hu
    Zhu, Jian-Long
    Hu, Hua
    JOURNAL OF CLINICAL LABORATORY ANALYSIS, 2022, 36 (04)
  • [4] Prognostic significance of signal transducer and activator of transcription 1 activation in breast cancer
    Widschwendter, A
    Tonko-Geymayer, S
    Welte, T
    Daxenbichler, G
    Marth, C
    Doppler, W
    CLINICAL CANCER RESEARCH, 2002, 8 (10) : 3065 - 3074
  • [5] Signal Transducer and Activator of Transcription 5b Promotes Malignant Progression In Glioma
    Gressot, Loyola Veronique
    Doucette, Tiffany
    Yang, Yuhui
    Fuller, Gregory
    Latha, Khatri
    Rao, Ganesh
    JOURNAL OF NEUROSURGERY, 2015, 122 (06) : A1563 - A1563
  • [6] Signal transducer and activator of transcription 3 promotes angiogenesis and drives malignant progression in glioma
    Doucette, Tiffany A.
    Kong, Ling-Yuan
    Yang, Yuhui
    Ferguson, Sherise D.
    Yang, Jinbo
    Wei, Jun
    Qiao, Wei
    Fuller, Gregory N.
    Bhat, Krishna P.
    Aldape, Kenneth
    Priebe, Waldemar
    Boegler, Oliver
    Heimberger, Amy B.
    Rao, Ganesh
    NEURO-ONCOLOGY, 2012, 14 (09) : 1136 - 1145
  • [7] Pan-cancer analysis reveals signal transducer and activator of transcription (STAT) gene family as biomarkers for prognostic prediction and therapeutic guidance
    Cheng, Mei
    Liu, Yifan
    Guo, Yangkun
    Li, Man
    Xian, Shuyuan
    Qin, Hengwei
    Yang, Yiting
    Qian, Weijin
    Tang, Jieling
    Lu, Yuwei
    Yao, Yuntao
    Zhang, Mengyi
    Jin, Minghao
    Xu, Long
    Huang, Runzhi
    Xu, Dayuan
    FRONTIERS IN GENETICS, 2023, 14
  • [8] Genomic distribution of signal transducer and activator of transcription (STAT) family in colorectal cancer
    Hu, Yanping
    Shen, Yifen
    Zhao, Yang
    Tang, Ying
    Liu, Chao
    Gu, Yongchun
    Yang, Tao
    Shen, Yihang
    HUMAN CELL, 2023, 36 (01) : 286 - 295
  • [9] Genomic distribution of signal transducer and activator of transcription (STAT) family in colorectal cancer
    Yanping Hu
    Yifen Shen
    Yang Zhao
    Ying Tang
    Chao Liu
    Yongchun Gu
    Tao Yang
    Yihang Shen
    Human Cell, 2023, 36 : 286 - 295
  • [10] Expression of Phosphorylated Signal Transducer and Activator of Transcription 3 and its Prognostic Significance in Canine Anal Sac Adenocarcinoma
    Mosca, Andrea
    Restif, Olivier
    Dobson, Jane
    Hughes, Katherine
    JOURNAL OF COMPARATIVE PATHOLOGY, 2021, 182 : 15 - 21