Cinnamomin: separation, crystallization and preliminary X-ray diffraction study

被引:3
作者
Wang, T.
Zou, Y. -S.
Zhu, D. -W. [1 ]
Azzi, A. [1 ]
Liu, W. -Y.
Lin, S. -X. [1 ]
机构
[1] CHUQ, CHUL Med Ctr, Lab Oncol & Mol Endocrinol, Quebec City, PQ, Canada
关键词
cinnamomin; crystallization; FPLC; hydrophobic interaction chromatography; ribosome-inactivating protein; X-ray crystal structure;
D O I
10.1007/s00726-006-0490-z
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Cinnamomin from Cinnamonum camphora seeds, a type II ribosome-inactivating protein that interferes with protein biosynthesis in mammalian cells, can induce the apoptosis of carcinoma cells and be used as an insecticide. A rapid and improved method has been developed for the extraction and purification of cinnamomin from camphora seed. Purification of cinnamomin is achieved with two successive steps of hydrophobic interaction chromatography carried out on a fast protein liquid chromatography (FPLC) system. Crystals suitable for X-ray diffraction analysis were obtained by vapor diffusion method. A complete data set at 2.8 angstrom resolution has been collected. Data indexation and refinement indicate that the crystal is orthorhombic with space group P2(1)2(1)2(1) and unit cell dimensions a = 52.39 angstrom, b = 126.33 angstrom, c = 161.45 angstrom. There are two molecules per asymmetric unit. Initial phasing by molecular replacement method yielded a solution, which will contribute to the structure determination. A molecular model will further the understanding of the mechanism of cinnamomin function. The latter will be combined with bio-informatics to facilitate the medical and other applications of cinnamomin.
引用
收藏
页码:239 / 243
页数:5
相关论文
共 25 条
[1]   RIBOSOME-INACTIVATING PROTEINS FROM PLANTS [J].
BARBIERI, L ;
BATTELLI, MG ;
STIRPE, F .
BIOCHIMICA ET BIOPHYSICA ACTA, 1993, 1154 (3-4) :237-282
[2]   Predicting protein-protein interactions from sequences in a hybridization space [J].
Chou, KC ;
Cai, YD .
JOURNAL OF PROTEOME RESEARCH, 2006, 5 (02) :316-322
[3]   Insights from modeling the 3D structure of DNA-CBF3b complex [J].
Chou, KC .
JOURNAL OF PROTEOME RESEARCH, 2005, 4 (05) :1657-1660
[4]   Structural bioinformatics and its impact to biomedical science [J].
Chou, KC .
CURRENT MEDICINAL CHEMISTRY, 2004, 11 (16) :2105-2134
[5]   Hum-PLoc: A novel ensemble classifier for predicting human protein subcellular localization [J].
Chou, Kuo-Chen ;
Shen, Hong-Bin .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2006, 347 (01) :150-157
[6]  
DURCUIX A, 1999, CRYSTALLIZATION NUCL, P121
[7]  
ENDO Y, 1987, J BIOL CHEM, V262, P5908
[8]   Both N- and C-terminal regions are essential for cinnamomin A-chain to deadenylate ribosomal RNA and supercoiled double-stranded DNA [J].
He, WJ ;
Liu, WY .
BIOCHEMICAL JOURNAL, 2004, 377 :17-23
[9]   SPARSE-MATRIX SAMPLING - A SCREENING METHOD FOR CRYSTALLIZATION OF PROTEINS [J].
JANCARIK, J ;
KIM, SH .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1991, 24 :409-411
[10]   Large-scale preparation of two new ribosome-inactivating proteins - Cinnamomin and camphorin from the seeds of Cinnamomum camphora [J].
Li, XD ;
Chen, WF ;
Liu, WY ;
Wang, GH .
PROTEIN EXPRESSION AND PURIFICATION, 1997, 10 (01) :27-31