A Simple, Inexpensive Device for Nucleic Acid Amplification without Electricity-Toward Instrument-Free Molecular Diagnostics in Low-Resource Settings

被引:111
作者
LaBarre, Paul [1 ]
Hawkins, Kenneth R. [1 ]
Gerlach, Jay [1 ]
Wilmoth, Jared [1 ]
Beddoe, Andrew [1 ]
Singleton, Jered [1 ]
Boyle, David [1 ]
Weigl, Bernhard [1 ]
机构
[1] PATH, Seattle, WA 98121 USA
来源
PLOS ONE | 2011年 / 6卷 / 05期
基金
美国国家卫生研究院;
关键词
MEDIATED ISOTHERMAL AMPLIFICATION; RAPID DETECTION; REVERSE-TRANSCRIPTION; DNA AMPLIFICATION; LAMP; ASSAY; TECHNOLOGIES; VIRUS; HIV-1;
D O I
10.1371/journal.pone.0019738
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Background: Molecular assays targeted to nucleic acid (NA) markers are becoming increasingly important to medical diagnostics. However, these are typically confined to wealthy, developed countries; or, to the national reference laboratories of developing-world countries. There are many infectious diseases that are endemic in low-resource settings (LRS) where the lack of simple, instrument-free, NA diagnostic tests is a critical barrier to timely treatment. One of the primary barriers to the practicality and availability of NA assays in LRS has been the complexity and power requirements of polymerase chain reaction (PCR) instrumentation (another is sample preparation). Methodology/Principal Findings: In this article, we investigate the hypothesis that an electricity-free heater based on exothermic chemical reactions and engineered phase change materials can successfully incubate isothermal NA amplification assays. We assess the heater's equivalence to commercially available PCR instruments through the characterization of the temperature profiles produced, and a minimal method comparison. Versions of the prototype for several different isothermal techniques are presented. Conclusions/Significance: We demonstrate that an electricity-free heater based on exothermic chemical reactions and engineered phase change materials can successfully incubate isothermal NA amplification assays, and that the results of those assays are not significantly different from ones incubated in parallel in commercially available PCR instruments. These results clearly suggest the potential of the non-instrumented nucleic acid amplification (NINA) heater for molecular diagnostics in LRS. When combined with other innovations in development that eliminate power requirements for sample preparation, cold reagent storage, and readout, the NINA heater will comprise part of a kit that should enable electricity-free NA testing for many important analytes.
引用
收藏
页数:8
相关论文
共 40 条
  • [31] Rapid and sensitive detection of Citrus Bacterial Canker by loop-mediated isothermal amplification combined with simple visual evaluation methods
    Rigano, Luciano A.
    Marano, Maria R.
    Castagnaro, Atilio P.
    Do Amaral, Alexandre Morais
    Vojnov, Adrian A.
    [J]. BMC MICROBIOLOGY, 2010, 10
  • [32] Development and evaluation of a novel loop-mediated isothermal amplification method for rapid detection of severe acute respiratory syndrome coronavirus
    Thai, HTC
    Le, MQ
    Vuong, CD
    Parida, M
    Minekawa, H
    Notomi, T
    Hasebe, F
    Morita, K
    [J]. JOURNAL OF CLINICAL MICROBIOLOGY, 2004, 42 (05) : 1956 - 1961
  • [33] Loop-mediated isothermal amplification (LAMP) of gene sequences and simple visual detection of products
    Tomita, Norihiro
    Mori, Yasuyoshi
    Kanda, Hidetoshi
    Notomi, Tsugunori
    [J]. NATURE PROTOCOLS, 2008, 3 (05) : 877 - 882
  • [34] Accelerating worldwide syphilis screening through rapid testing: a systematic review
    Tucker, Joseph D.
    Bu, Jin
    Brown, Lillian B.
    Yin, Yue-Pin
    Chen, Xiang-Sheng
    Cohen, Myron S.
    [J]. LANCET INFECTIOUS DISEASES, 2010, 10 (06) : 381 - 386
  • [35] Requirements for high impact diagnostics in the developing world.
    Urdea M.
    Penny L.A.
    Olmsted S.S.
    Giovanni M.Y.
    Kaspar P.
    Shepherd A.
    Wilson P.
    Dahl C.A.
    Buchsbaum S.
    Moeller G.
    Hay Burgess D.C.
    [J]. Nature, 2006, 444 (Suppl 1) : 73 - 79
  • [36] Simplicity of use: a critical feature for widespread adoption of diagnostic technologies in low-resource settings
    Weigl, B. H.
    Boyle, D. S.
    de los Santos, T.
    Peck, R. B.
    Steele, M. S.
    [J]. EXPERT REVIEW OF MEDICAL DEVICES, 2009, 6 (05) : 461 - 464
  • [37] Towards non- and minimally instrumented, microfluidics-based diagnostic devices
    Weigl, Bernhard
    Domingo, Gonzalo
    LaBarre, Paul
    Gerlach, Jay
    [J]. LAB ON A CHIP, 2008, 8 (12) : 1999 - 2014
  • [38] Emerging Molecular Assays for Detection and Characterization of Respiratory Viruses
    Wu, Wenjuan
    Tang, Yi-Wei
    [J]. CLINICS IN LABORATORY MEDICINE, 2009, 29 (04) : 673 - +
  • [39] Microfluidic diagnostic technologies for global public health
    Yager, Paul
    Edwards, Thayne
    Fu, Elain
    Helton, Kristen
    Nelson, Kjell
    Tam, Milton R.
    Weigl, Bernhard H.
    [J]. NATURE, 2006, 442 (7101) : 412 - 418
  • [40] 2010, FACTORS AFFECTING QU