A hybrid deep learning paradigm for carotid plaque tissue characterization and its validation in multicenter cohorts using a supercomputer framework

被引:39
作者
Skandha, Sanagala S. [1 ,2 ]
Nicolaides, Andrew [3 ]
Gupta, Suneet K. [2 ]
Koppula, Vijaya K. [1 ]
Saba, Luca [4 ]
Johri, Amer M. [5 ]
Kalra, Manudeep S. [6 ]
Suri, Jasjit S. [7 ]
机构
[1] CMR Coll Engn & Technol, CSE Dept, Hyderabad, India
[2] Bennett Univ, CSE Dept, Greater Noida, UP, India
[3] Univ Nicosia, Vasc Screening & Diagnost Ctr, Nicosia, Cyprus
[4] Azienda Osped Univ AOU, Dept Radiol, Cagliari, Italy
[5] Queens Univ, Dept Med, Div Cardiol, Kingston, ON, Canada
[6] Massachusetts Gen Hosp, Dept Radiol, 55 Fruit St, Boston, MA 02114 USA
[7] AtheroPoint LLC, Stroke Diagnost & Monitoring Div, Roseville, CA 95661 USA
关键词
Atheromatic (TM) 2.0(HDL ); Carotid plaque tissue characterization; Stroke; Artificial intelligence; Hybrid deep learning; Machine learning; Transfer learning; Performance; RISK STRATIFICATION; AUTOMATED CLASSIFICATION; ULTRASOUND; FEATURES; STENOSIS; STRATEGY; ACCURATE; TEXTURE; CANCER; IMAGES;
D O I
10.1016/j.compbiomed.2021.105131
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Background: Early and automated detection of carotid plaques prevents strokes, which are the second leading cause of death worldwide according to the World Health Organization. Artificial intelligence (AI) offers automated solutions for plaque tissue characterization. Recently, solo deep learning (SDL) models have been used, but they do not take advantage of the tandem connectivity offered by AI's hybrid nature. Therefore, this study explores the use of hybrid deep learning (HDL) models in a multicenter framework, making this study the first of its kind. Methods: We hypothesize that HDL techniques perform better than SDL and transfer learning (TL) techniques. We propose two kinds of HDL frameworks: (i) the fusion of two SDLs (Inception with ResNet) or (ii) 10 other kinds of tandem models that fuse SDL with ML. The system Atheromatic (TM) 2.0(HDL) (AtheroPoint, CA, USA) was designed on an augmentation framework and three kinds of loss functions (cross-entropy, hinge, and mean-square-error) during training to determine the best optimization paradigm. These 11 combined HDL models were then benchmarked against one SDL model and five types of TL models; thus, this study considers a total of 17 AI models. Results: Among the 17 AI models, the best performing HDL system was that comprising CNN and decision tree (DT), as its accuracy and area-under-the-curve were 99.78 +/- 1.05% and 0.99 (p<0.0001), respectively. These values are 6.4% and 3.2% better than those recorded for the SDL and TL models, respectively. We validated the performance of the HDL models with diagnostics odds ratio (DOR) and Cohen and Kappa statistics; here, HDL outperformed DL and TL by 23% and 7%, respectively. The online system ran in <2 s. Conclusion: HDL is a fast, reliable, and effective tool for characterizing the carotid plaque for early stroke risk stratification.
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收藏
页数:13
相关论文
共 89 条
[1]   Robust hybrid deep learning models for Alzheimer's progression detection [J].
Abuhmed, Tamer ;
El-Sappagh, Shaker ;
Alonso, Jose M. .
KNOWLEDGE-BASED SYSTEMS, 2021, 213
[2]   Automated classification of patients with coronary artery disease using grayscale features from left ventricle echocardiographic images [J].
Acharya, J. Rajendra ;
Sree, S. Vinitha ;
Krishnan, M. Muthu Rama ;
Krishnananda, N. ;
Ranjan, Shetty ;
Umesh, Pai ;
Suri, Jasjit S. .
COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE, 2013, 112 (03) :624-632
[3]   Computed tomography carotid wall plaque characterization using a combination of discrete wavelet transform and texture features: A pilot study [J].
Acharya, U. R. ;
Sree, S. Vinitha ;
Mookiah, M. R. K. ;
Saba, L. ;
Gao, H. ;
Mallarini, G. ;
Suri, J. S. .
PROCEEDINGS OF THE INSTITUTION OF MECHANICAL ENGINEERS PART H-JOURNAL OF ENGINEERING IN MEDICINE, 2013, 227 (H6) :643-654
[4]   Cost-Effective and Non-Invasive Automated Benign & Malignant Thyroid Lesion Classification in 3D Contrast-Enhanced Ultrasound Using Combination of Wavelets and Textures: A Class of ThyroScan™ Algorithms [J].
Acharya, U. R. ;
Faust, O. ;
Sree, S. V. ;
Molinari, F. ;
Garberoglio, R. ;
Suri, J. S. .
TECHNOLOGY IN CANCER RESEARCH & TREATMENT, 2011, 10 (04) :371-380
[5]   GyneScan: An Improved Online Paradigm for Screening of Ovarian Cancer via Tissue Characterization [J].
Acharya, U. Rajendra ;
Sree, S. Vinitha ;
Kulshreshtha, Sanjeev ;
Molinari, Filippo ;
Koh, Joel En Wei ;
Saba, Luca ;
Suri, Jasjit S. .
TECHNOLOGY IN CANCER RESEARCH & TREATMENT, 2014, 13 (06) :529-539
[6]   A Review on Ultrasound-based Thyroid Cancer Tissue Characterization and Automated Classification [J].
Acharya, U. Rajendra ;
Swapna, G. ;
Sree, S. Vinitha ;
Molinari, Filippo ;
Gupta, Savita ;
Bardales, Ricardo H. ;
Witkowska, Agnieszka ;
Suri, Jasjit S. .
TECHNOLOGY IN CANCER RESEARCH & TREATMENT, 2014, 13 (04) :289-301
[7]   Ovarian Tumor Characterization and Classification Using Ultrasound-A New Online Paradigm [J].
Acharya, U. Rajendra ;
Sree, S. Vinitha ;
Saba, Luca ;
Molinari, Filippo ;
Guerriero, Stefano ;
Suri, Jasjit S. .
JOURNAL OF DIGITAL IMAGING, 2013, 26 (03) :544-553
[8]   Atherosclerotic plaque tissue characterization in 2D ultrasound longitudinal carotid scans for automated classification: a paradigm for stroke risk assessment [J].
Acharya, U. Rajendra ;
Mookiah, Muthu Rama Krishnan ;
Sree, S. Vinitha ;
Afonso, David ;
Sanches, Joao ;
Shafique, Shoaib ;
Nicolaides, Andrew ;
Pedro, L. M. ;
Fernandes e Fernandes, J. ;
Suri, Jasjit S. .
MEDICAL & BIOLOGICAL ENGINEERING & COMPUTING, 2013, 51 (05) :513-523
[9]   ATHEROSCLEROTIC RISK STRATIFICATION STRATEGY FOR CAROTID ARTERIES USING TEXTURE-BASED FEATURES [J].
Acharya, U. Rajendra ;
Sree, S. Vinitha ;
Krishnan, M. Muthu Rama ;
Molinari, Filippo ;
Saba, Luca ;
Ho, Sin Yee Stella ;
Ahuja, Anil T. ;
Ho, Suzanne C. ;
Nicolaides, Andrew ;
Suri, Jasjit S. .
ULTRASOUND IN MEDICINE AND BIOLOGY, 2012, 38 (06) :899-915
[10]   An Accurate and Generalized Approach to Plaque Characterization in 346 Carotid Ultrasound Scans [J].
Acharya, U. Rajendra ;
Faust, Oliver ;
Sree, S. Vinitha ;
Molinari, Filippo ;
Saba, Luca ;
Nicolaides, Andrew ;
Suri, Jasjit S. .
IEEE TRANSACTIONS ON INSTRUMENTATION AND MEASUREMENT, 2012, 61 (04) :1045-1053