Quantitative Structure-Activity Relationship Modeling and Docking of Monoterpenes with Insecticidal Activity Against Reticulitermes chinensis Snyder and Drosophila melanogaster

被引:15
作者
Soares Rodrigues, Gabriela Cristina [1 ]
Maia, Mayara dos Santos [1 ]
Muratov, Eugene N. [2 ]
Scotti, Luciana [1 ]
Scotti, Marcus Tullius [1 ]
机构
[1] Univ Fed Paraiba, Hlth Sci Ctr, Lab Cheminformat, Program Nat & Synthet Bioact Prod PgPNSB, BR-58051900 Joao Pessoa, Paraiba, Brazil
[2] Univ N Carolina, Eshelman Sch Pharm, Div Chem Biol & Med Chem, Lab Mol Modeling, Chapel Hill, NC 27599 USA
关键词
monoterpenes; insecticidal activity; QSAR; docking; FRUIT-FLY; CHEMINFORMATICS; RESISTANCE; TOXICITY; FIPRONIL; INSIGHTS; CURATION; VERIFY; TRUST;
D O I
10.1021/acs.jafc.0c00272
中图分类号
S [农业科学];
学科分类号
09 ;
摘要
The goal of this study was to perform in silico identification of bioinsecticidal potential of 42 monoterpenes against Drosophila melanogaster and Reticulitermes chinensis Snyder. Quantitative structure-activity relationship (QSAR) modeling was performed for both organisms, while docking and molecular dynamics were used only for Drosophila melanogaster. Neryl acetate has the lowest interaction energy (-87 kcal/mol) against active site of acetylcholinesterase, which is comparable to the ones of methiocarb and pirimicarb (-90 kcal/mol) and reported PDB binder 9-(3-iodobenzylamino)-1,2,3,4-tetrahydroacridine (-112.67 kcal/mol). Interaction stability was verified by molecular dynamics simulations and showed that the stability of ACHE active site complexes with three selected terpenes is comparable to the one of the pirimicarb and methiocarb. Overall, our results suggest that pulegone, citronellal, carvacrol, linalyl acetate, neryl acetate, citronellyl acetate, and geranyl acetate may be considered as a potential pesticide candidates.
引用
收藏
页码:4687 / 4698
页数:12
相关论文
共 32 条
[11]   QSAR Modeling: Where Have You Been? Where Are You Going To? [J].
Cherkasov, Artem ;
Muratov, Eugene N. ;
Fourches, Denis ;
Varnek, Alexandre ;
Baskin, Igor I. ;
Cronin, Mark ;
Dearden, John ;
Gramatica, Paola ;
Martin, Yvonne C. ;
Todeschini, Roberto ;
Consonni, Viviana ;
Kuz'min, Victor E. ;
Cramer, Richard ;
Benigni, Romualdo ;
Yang, Chihae ;
Rathman, James ;
Terfloth, Lothar ;
Gasteiger, Johann ;
Richard, Ann ;
Tropsha, Alexander .
JOURNAL OF MEDICINAL CHEMISTRY, 2014, 57 (12) :4977-5010
[12]   A Review of Bioinsecticidal Activity of Solanaceae Alkaloids [J].
Chowanski, Szymon ;
Adamski, Zbigniew ;
Marciniak, Pawel ;
Rosinski, Grzegorz ;
Buyukguzel, Ender ;
Buyukguzel, Kemal ;
Falabella, Patrizia ;
Scrano, Laura ;
Ventrella, Emanuela ;
Lelario, Filomena ;
Bufo, Sabino A. .
TOXINS, 2016, 8 (03)
[13]   Using Drosophila melanogaster to validate metabolism-based insecticide resistance from insect pests [J].
Daborn, Phillip J. ;
Lumb, Christopher ;
Harrop, Thomas W. R. ;
Blasetti, Alex ;
Pasricha, Shivani ;
Morin, Shai ;
Mitchell, Sara N. ;
Donnelly, Martin J. ;
Mueller, Pie ;
Batterham, Philip .
INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY, 2012, 42 (12) :918-924
[14]   Pesticide Exposure, Safety Issues, and Risk Assessment Indicators [J].
Damalas, Christos A. ;
Eleftherohorinos, Ilias G. .
INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH, 2011, 8 (05) :1402-1419
[15]  
de Andrade D. J., 2010, REV BRAS FRUTIC, V32
[16]   Trust, but Verify II: A Practical Guide to Chemogenomics Data Curation [J].
Fourches, Denis ;
Muratov, Eugene ;
Tropsha, Alexander .
JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2016, 56 (07) :1243-1252
[17]   Curation of chemogenomics data [J].
Fourches, Denis ;
Muratov, Eugene ;
Tropsha, Alexander .
NATURE CHEMICAL BIOLOGY, 2015, 11 (08) :535-535
[18]   Trust, But Verify: On the Importance of Chemical Structure Curation in Cheminformatics and QSAR Modeling Research [J].
Fourches, Denis ;
Muratov, Eugene ;
Tropsha, Alexander .
JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2010, 50 (07) :1189-1204
[19]   Bioactivity of diatomaceous earth against the subterranean termite Reticulitermes chinensis Snyder (Isoptera: Rhinotermitidae) [J].
Gao, Yongyong ;
Yu, Shuxin ;
Li, Jingjian ;
Sun, Pengdong ;
Xiong, Min ;
Lei, Chaoliang ;
Zhang, Zubin ;
Huang, Qiuying .
ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH, 2018, 25 (28) :28102-28108
[20]   Three-dimensional structures of Drosophila melanogaster acetylcholinesterase and of its complexes with two potent inhibitors [J].
Harel, M ;
Kryger, G ;
Rosenberry, TL ;
Mallender, WD ;
Lewis, T ;
Fletcher, RJ ;
Guss, JM ;
Silman, I ;
Sussman, JL .
PROTEIN SCIENCE, 2000, 9 (06) :1063-1072