A Redox Role for the [4Fe4S] Cluster of Yeast DNA Polymerase δ

被引:35
作者
Bartels, Phillip L. [1 ]
Stodola, Joseph L. [2 ]
Burgers, Peter M. J. [2 ]
Barton, Jacqueline K. [1 ]
机构
[1] CALTECH, Div Chem & Chem Engn, Pasadena, CA 91125 USA
[2] Washington Univ, Sch Med, Dept Biochem & Mol Biophys, St Louis, MO 63110 USA
基金
美国国家科学基金会;
关键词
IRON-SULFUR CLUSTER; CHARGE-TRANSPORT; 4FE-4S CLUSTERS; REPLICATION FORKS; REPAIR PROTEINS; HUMAN-CELLS; DUPLEX DNA; DELTA; ELECTROCHEMISTRY; FERREDOXIN;
D O I
10.1021/jacs.7b10284
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
A [4Fe4S](2+) cluster in the C-terminal domain of the catalytic subunit of the eukaryotic B-family DNA polymerases is essential for the formation of active multi-subunit complexes. Here we use a combination of electrochemical and biochemical methods to assess the redox activity of the [4Fe4S](2+) cluster in Saccharomyces cerevisiae polymerase (Pol) delta, the lagging strand DNA polymerase. We find that Pol delta bound to DNA is indeed redox-active at physiological potentials, generating a DNA-mediated signal electrochemically with a midpoint potential of 113 +/- 5 mV versus NHE. Moreover, biochemical assays following electrochemical oxidation of Pol delta reveal a significant slowing of DNA synthesis that can be fully reversed by reduction of the oxidized form. A similar result is apparent with photooxidation using a DNA-tethered anthraquinone. These results demonstrate that the [4Fe4S] cluster in Pol delta can act as a redox switch for activity, and we propose that this switch can provide a rapid and reversible way to respond to replication stress.
引用
收藏
页码:18339 / 18348
页数:10
相关论文
共 63 条
[31]   Pol31 and Pol32 subunits of yeast DNA polymerase δ are also essential subunits of DNA polymerase ζ [J].
Johnson, Robert E. ;
Prakash, Louise ;
Prakash, Satya .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2012, 109 (31) :12455-12460
[32]   Electrochemistry of methylene blue bound to a DNA-modified electrode [J].
Kelley, SO ;
Barton, JK ;
Jackson, NM ;
Hill, MG .
BIOCONJUGATE CHEMISTRY, 1997, 8 (01) :31-37
[33]  
Kissinger P.T., 1996, LAB TECHNIQUES ELECT, P51
[34]   3D architecture of DNA Pol α reveals the functional core of multi-subunit replicative polymerases [J].
Klinge, Sebastian ;
Nunez-Ramirez, Rafael ;
Llorca, Oscar ;
Pellegrini, Luca .
EMBO JOURNAL, 2009, 28 (13) :1978-1987
[35]  
Kulak NA, 2014, NAT METHODS, V11, P319, DOI [10.1038/nmeth.2834, 10.1038/NMETH.2834]
[36]   Monitoring S phase progression globally and locally using BrdU incorporation in TK+ yeast strains [J].
Lengronne, A ;
Pasero, P ;
Bensimon, A ;
Schwob, E .
NUCLEIC ACIDS RESEARCH, 2001, 29 (07) :1433-1442
[37]  
LODE ET, 1976, J BIOL CHEM, V251, P1683
[38]   DNA Polymerases Divide the Labor of Genome Replication [J].
Lujan, Scott A. ;
Williams, Jessica S. ;
Kunkel, Thomas A. .
TRENDS IN CELL BIOLOGY, 2016, 26 (09) :640-654
[39]  
Markkanen Enni, 2013, Frontiers in Genetics, V4, P18, DOI 10.3389/fgene.2013.00018
[40]   The efficiency and fidelity of 8-oxo-guanine bypass by DNA polymerases and [J].
McCulloch, Scott D. ;
Kokoska, Robert J. ;
Garg, Parie ;
Burgers, Peter M. ;
Kunkel, Thomas A. .
NUCLEIC ACIDS RESEARCH, 2009, 37 (09) :2830-2840