A Redox Role for the [4Fe4S] Cluster of Yeast DNA Polymerase δ

被引:35
作者
Bartels, Phillip L. [1 ]
Stodola, Joseph L. [2 ]
Burgers, Peter M. J. [2 ]
Barton, Jacqueline K. [1 ]
机构
[1] CALTECH, Div Chem & Chem Engn, Pasadena, CA 91125 USA
[2] Washington Univ, Sch Med, Dept Biochem & Mol Biophys, St Louis, MO 63110 USA
基金
美国国家科学基金会;
关键词
IRON-SULFUR CLUSTER; CHARGE-TRANSPORT; 4FE-4S CLUSTERS; REPLICATION FORKS; REPAIR PROTEINS; HUMAN-CELLS; DUPLEX DNA; DELTA; ELECTROCHEMISTRY; FERREDOXIN;
D O I
10.1021/jacs.7b10284
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
A [4Fe4S](2+) cluster in the C-terminal domain of the catalytic subunit of the eukaryotic B-family DNA polymerases is essential for the formation of active multi-subunit complexes. Here we use a combination of electrochemical and biochemical methods to assess the redox activity of the [4Fe4S](2+) cluster in Saccharomyces cerevisiae polymerase (Pol) delta, the lagging strand DNA polymerase. We find that Pol delta bound to DNA is indeed redox-active at physiological potentials, generating a DNA-mediated signal electrochemically with a midpoint potential of 113 +/- 5 mV versus NHE. Moreover, biochemical assays following electrochemical oxidation of Pol delta reveal a significant slowing of DNA synthesis that can be fully reversed by reduction of the oxidized form. A similar result is apparent with photooxidation using a DNA-tethered anthraquinone. These results demonstrate that the [4Fe4S] cluster in Pol delta can act as a redox switch for activity, and we propose that this switch can provide a rapid and reversible way to respond to replication stress.
引用
收藏
页码:18339 / 18348
页数:10
相关论文
共 63 条
[1]   CATIONIC ANTHRAQUINONE DERIVATIVES AS CATALYTIC DNA PHOTONUCLEASES - MECHANISMS FOR DNA-DAMAGE AND QUINONE RECYCLING [J].
ARMITAGE, B ;
YU, CJ ;
DEVADOSS, C ;
SCHUSTER, GB .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1994, 116 (22) :9847-9859
[2]   DNA Charge Transport: from Chemical Principles to the Cell [J].
Arnold, Anna R. ;
Grodick, Michael A. ;
Barton, Jacqueline K. .
CELL CHEMICAL BIOLOGY, 2016, 23 (01) :183-197
[3]   Ionizing radiation-induced metabolic oxidative stress and prolonged cell injury [J].
Azzam, Edouard I. ;
Jay-Gerin, Jean-Paul ;
Pain, Debkumar .
CANCER LETTERS, 2012, 327 (1-2) :48-60
[4]   DNA Polymerase δ and ζ Switch by Sharing Accessory Subunits of DNA Polymerase δ [J].
Baranovskiy, Andrey G. ;
Lada, Artem G. ;
Siebler, Hollie M. ;
Zhang, Yinbo ;
Pavlov, Youri I. ;
Tahirov, Tahir H. .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2012, 287 (21) :17281-17287
[5]   Electrochemistry of the [4Fe4S] Cluster in Base Excision Repair Proteins: Tuning the Redox Potential with DNA [J].
Bartels, Phillip L. ;
Zhou, Andy ;
Arnold, Anna R. ;
Nunez, Nicole N. ;
Crespilho, Frank N. ;
David, Sheila S. ;
Barton, Jacqueline K. .
LANGMUIR, 2017, 33 (10) :2523-2530
[6]   Replication stress: getting back on track [J].
Berti, Matteo ;
Vindigni, Alessandro .
NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2016, 23 (02) :103-109
[7]   DNA-bound redox activity of DNA repair glycosylases containing [4Fe-4S] clusters [J].
Boal, AK ;
Yavin, E ;
Lukianova, OA ;
O'Shea, VL ;
David, SS ;
Barton, JK .
BIOCHEMISTRY, 2005, 44 (23) :8397-8407
[8]   An electrical probe of protein-DNA interactions on DNA-modified surfaces [J].
Boon, EM ;
Salas, JE ;
Barton, JK .
NATURE BIOTECHNOLOGY, 2002, 20 (03) :282-286
[9]   Eukaryotic DNA Replication Fork [J].
Burgers, Peter M. J. ;
Kunkel, Thomas A. .
ANNUAL REVIEW OF BIOCHEMISTRY, VOL 86, 2017, 86 :417-438
[10]  
BURGERS PMJ, 1993, J BIOL CHEM, V268, P19923