A defect of ligD (human lig4 homolog) for nonhomologous end joining significantly improves efficiency of gene-targeting in Aspergillus oryzae

被引:114
作者
Mizutani, Osamu [1 ]
Kudo, Youhei [1 ]
Saito, Akemi [1 ]
Matsuura, Tomomi [1 ]
Inoue, Hirokazu [2 ]
Abe, Keietsu [3 ]
Gomi, Katsuya [1 ]
机构
[1] Tohoku Univ, Grad Sch Agr Sci, Dept Bioind Informat & Genom, Lab Bioind Genom,Aoba Ku, Sendai, Miyagi 9818555, Japan
[2] Saitama Univ, Fac Sci, Dept Regulat Biol, Genet Lab,Sakura Ku, Saitama 3388570, Japan
[3] Tohoku Univ, Grad Sch Agr Sci, Enzymol Lab, Aoba Ku, Sendai, Miyagi 9818555, Japan
基金
日本学术振兴会;
关键词
Aspergillus oryzae; DNA ligase IV (ligD); gene-targeting; homologous recombination; mitogen-activated protein kinase (MAPK);
D O I
10.1016/j.fgb.2007.12.010
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Gene-targeting by homologous recombination occurs rarely during transformation since nonhomologous recombination is predominant in Aspergillus oryzae. To develop a highly efficient gene-targeting system for A. oryzae, we constructed disrupted strains harboring a gene (ligD) encoding human DNA ligase IV homolog that is involved in the final step of DNA nonhomologous end joining. The A. oryzae ligD disruptants showed no apparent defect in vegetative growth and/or conidiation, and exhibited increased sensitivity to high concentration of methyl methansulfonate causing double-stranded DNA breaks compared with that of wild-type strain, but not to ethyl methanesulfonate and phleomycin. Gene replacement of the prtR, a gene encoding a transcription factor which regulates extracellular proteolytic genes, using the Aspergillus nidulans sC gene as the selectable marker resulted in 100% of gene-targeting efficiency in the ligD disruptant, compared to less than 30% for a wild-type, when the length of the homologous flanking sequences used was longer than 0.5 kb. Similarly, gene-targeting efficiency was as high as 100% for aspartic protease-encoding gene (pepA). Furthermore, using this ligD disruptant system of A. oryzae, we readily succeeded in disrupting five mitogen-activated protein kinase (MAPK) genes, namely mpkA, mpkB, hogA, mpkC and A. oryzae unique MAPK (mpkD). Such results show that the ligD disruptant system is an extremely convenient genetic background for gene-targeting in A. oryzae. (c) 2008 Elsevier Inc. All rights reserved.
引用
收藏
页码:878 / 889
页数:12
相关论文
共 51 条
[1]  
[Anonymous], 1998, METHODS YEAST GENETI
[2]  
[Anonymous], 2001, Anal Biochem
[3]   A mitogen-activated protein kinase (MPKA) is involved in polarized growth in the filamentous fungus, Aspergillus nidulans [J].
Bussink, HJ ;
Osmani, SA .
FEMS MICROBIOLOGY LETTERS, 1999, 173 (01) :117-125
[4]   chsZ, a gene for a novel class of chitin synthase from Aspergillus oryzae [J].
Chigira, Y ;
Abe, K ;
Gomi, K ;
Nakajima, T .
CURRENT GENETICS, 2002, 41 (04) :261-267
[5]  
CHRISTENSEN T, 1998, BIOTECHNOLOGY, V6, P1419
[6]   A high-throughput gene knockout procedure for Neurospora reveals functions for multiple transcription factors [J].
Colot, Hildur V. ;
Park, Gyungsoon ;
Turner, Gloria E. ;
Ringelberg, Carol ;
Crew, Christopher M. ;
Litvinkova, Liubov ;
Weiss, Richard L. ;
Borkovich, Katherine A. ;
Dunlap, Jay C. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2006, 103 (27) :10352-10357
[7]   Nonhomologous end joining in yeast [J].
Daley, JM ;
Palmbos, PL ;
Wu, DL ;
Wilson, TE .
ANNUAL REVIEW OF GENETICS, 2005, 39 :431-451
[8]   The role of the sakA (Hog1) and tcsB (s1n1) genes in the oxidant adaptation of Aspergillus fumigatus [J].
Du, Chen ;
Sarfati, Jacqueline ;
Latge, J. -P. ;
Calderone, Richard .
MEDICAL MYCOLOGY, 2006, 44 (03) :211-218
[9]   The akuBKU80 mutant deficient for nonhomologous end joining is a powerful tool for analyzing pathogenicity in Aspergillus fumigatus [J].
Ferreira, MED ;
Kress, MRVZ ;
Savoldi, M ;
Goldman, MHS ;
Härtl, A ;
Heinekamp, T ;
Brakhage, AA ;
Goldman, GH .
EUKARYOTIC CELL, 2006, 5 (01) :207-211
[10]  
FUJIOKA T, 2007, CELL, V6, P1497