Are conical intersections responsible for the ultrafast processes of adenine, protonated adenine, and the corresponding nucleosides?

被引:83
作者
Nielsen, SB
Solling, TI [1 ]
机构
[1] Univ Copenhagen, Dept Chem, DK-2100 Copenhagen, Denmark
[2] Aarhus Univ, Dept Phys & Astron, DK-8000 Aarhus, Denmark
关键词
adenine; conical intersections; density functional calculations; molecular dynamics; nucleosides;
D O I
10.1002/cphc.200400644
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Excited-state potential energy surfaces of adenine, protonated adenine, and their N9-methylated analogs are explored by means of a complete active space (CAS) and time-dependent density functional theory (TD-DFT) study to understand the dynamics associated with internal conversion. After photoexcitation of the ground-state molecules to the S-1 state, the nuclear motions that are responsible for taking the wavepacket out of the Franck-Condon region are either an H-N9/C-N9 stretch or a ring-puckering motion that leads to pyramidalization. These motions lead to accessible conical intersections with the ground-state surface. The results are used to successfully interpret previous measurements on the photodissociation of adenosine 5'-monophosphate nucleotide anions and cations, where the latter react in a highly nonstatistical manner.
引用
收藏
页码:1276 / 1281
页数:6
相关论文
共 21 条
[11]   Mechanism for ultrafast internal conversion of adenine [J].
Kang, H ;
Jung, B ;
Kim, SK .
JOURNAL OF CHEMICAL PHYSICS, 2003, 118 (15) :6717-6719
[12]   Excited state spectroscopy and dynamics of isolated adenine and 9-methyladenine [J].
Lührs, DC ;
Viallon, J ;
Fischer, I .
PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2001, 3 (10) :1827-1831
[13]   Theoretical study of the photophysics of adenine in solution: Tautomerism, deactivation mechanisms, and comparison with the 2-aminopurine fluorescent isomer [J].
Mennucci, B ;
Toniolo, A ;
Tomasi, J .
JOURNAL OF PHYSICAL CHEMISTRY A, 2001, 105 (19) :4749-4757
[14]   Photodestruction of adenosine 5′-monophosphate (AMP) nucleotide ions in vacuo:: Statistical versus nonstatistical processes -: art. no. 048302 [J].
Nielsen, SB ;
Andersen, JU ;
Forster, JS ;
Hvelplund, P ;
Liu, B ;
Pedersen, UV ;
Tomita, S .
PHYSICAL REVIEW LETTERS, 2003, 91 (04) :1-048302
[15]   On the photochemistry of purine nucleobases [J].
Nir, E ;
Kleinermanns, K ;
Grace, L ;
de Vries, MS .
JOURNAL OF PHYSICAL CHEMISTRY A, 2001, 105 (21) :5106-5110
[16]   DNA excited-state dynamics: Ultrafast internal conversion and vibrational cooling in a series of nucleosides [J].
Pecourt, JML ;
Peon, J ;
Kohler, B .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2001, 123 (42) :10370-10378
[17]   DNA/RNA nucleotides and nucleosides: direct measurement of excited-state lifetimes by femtosecond fluorescence up-conversion [J].
Peon, J ;
Zewail, AH .
CHEMICAL PHYSICS LETTERS, 2001, 348 (3-4) :255-262
[18]   Theoretical study of gas phase tautomerization reactions for the ground and first excited electronic states of adenine [J].
Salter, LM ;
Chaban, GM .
JOURNAL OF PHYSICAL CHEMISTRY A, 2002, 106 (16) :4251-4256
[19]   On the mechanism of nonradiative decay of DNA bases: ab initio and TDDFT results for the excited states of 9H-adenine [J].
Sobolewski, AL ;
Domcke, W .
EUROPEAN PHYSICAL JOURNAL D, 2002, 20 (03) :369-374
[20]   Excited-state hydrogen detachment and hydrogen transfer driven by repulsive 1πσ* states:: A new paradigm for nonradiative decay in aromatic biomolecules [J].
Sobolewski, AL ;
Domcke, W ;
Dedonder-Lardeux, C ;
Jouvet, C .
PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2002, 4 (07) :1093-1100