Novel approach for labeling of biopolymers with DOTA complexes using in situ click chemistry for quantification

被引:15
作者
He, Yide [1 ]
Esteban-Fernandez, Diego [1 ]
Linscheid, Michael W. [1 ]
机构
[1] Humboldt Univ, Dept Chem, D-12489 Berlin, Germany
关键词
Click chemistry; Ln-MeCAT-Click; Biopolymer quantification; ICP-MS; ESI-MS; Labeling efficiency; TAG (MECAT)-LABELED PEPTIDES; CODED AFFINITY TAGS; QUANTITATIVE PROTEOMICS; FRAGMENTATION BEHAVIOR; AMINO-ACIDS; MECAT; CYCLOADDITION; RADICALS;
D O I
10.1016/j.talanta.2014.11.049
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
In this work, we present a two-step labeling approach for the efficient tagging with lanthanide-containing complexes. For this purpose, derivatization of the cysteine residues with an alkyne group acting as linker was done before the DOTA complex was introduced using in situ click chemistry. The characterization of this new methodology is presented including the optimization of the labeling process, demonstration of the quantitative capabilities using both electrospray ionization mass spectrometry (ESI-MS) and inductively coupled plasma mass spectrometry (ICP-MS) detection, and study of the fragmentation behavior of the labeled peptides by collision-induced dissociation (CID) for identification purposes. The results show that, in terms of labeling efficiency, this new methodology improves previously developed DOTA-based label strategies, such as MeCAT-maleimide (metal-coded affinity tag, MeCAT-Mal) and MeCAT-iodoacetamide (MeCAT-IA) reagents. The goal of reducing the steric hindrance caused by the voluminous DOTA complex was fulfilled allowing both, quantification and identification of labeled biopolymers. (C) 2014 Elsevier B.V. All rights reserved.
引用
收藏
页码:468 / 475
页数:8
相关论文
共 31 条
[1]   A metal-coded affinity tag approach to quantitative proteomics [J].
Ahrends, Robert ;
Pieper, Stefan ;
Kuehn, Andreas ;
Weisshoff, Hardy ;
Hamester, Meike ;
Lindemann, Torsten ;
Scheler, Christian ;
Lehmann, Karola ;
Taubner, Kerstin ;
Linscheid, Michael W. .
MOLECULAR & CELLULAR PROTEOMICS, 2007, 6 (11) :1907-1916
[2]   Metal-Coded Affinity Tag Labeling: A Demonstration of Analytical Robustness and Suitability for Biological Applications [J].
Ahrends, Robert ;
Pieper, Stefan ;
Neumann, Boris ;
Scheler, Christian ;
Linscheid, Michael W. .
ANALYTICAL CHEMISTRY, 2009, 81 (06) :2176-2184
[3]   Application of Metal-Coded Affinity Tags (MeCAT): Absolute Protein Quantification with Top-Down and Bottom-Up Workflows by Metal-Coded Tagging [J].
Bergmann, U. ;
Ahrends, R. ;
Neumann, B. ;
Scheler, C. ;
Linscheid, M. W. .
ANALYTICAL CHEMISTRY, 2012, 84 (12) :5268-5275
[4]  
DAVIES KJA, 1987, J BIOL CHEM, V262, P9902
[5]   Dual labeling of biomolecules using MeCAT and DOTA derivatives: application to quantitative proteomics [J].
El-Khatib, Ahmed H. ;
Esteban-Fernandez, Diego ;
Linscheid, Michael W. .
ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 2012, 403 (08) :2255-2267
[6]   MeCAT labeling for absolute quantification of intact proteins using label-specific isotope dilution ICP-MS [J].
Esteban-Fernandez, D. ;
Bierkandt, F. S. ;
Linscheid, M. W. .
JOURNAL OF ANALYTICAL ATOMIC SPECTROMETRY, 2012, 27 (10) :1701-1708
[7]   Absolute protein quantification by LC-ICP-MS using MeCAT peptide labeling [J].
Esteban-Fernandez, Diego ;
Scheler, Christian ;
Linscheid, Michael W. .
ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 2011, 401 (02) :657-666
[8]   Oxidative scission of plant cell wall polysaccharides by ascorbate-induced hydroxyl radicals [J].
Fry, SC .
BIOCHEMICAL JOURNAL, 1998, 332 :507-515
[9]   Absolute quantification of proteins and phosphoproteins from cell lysates by tandem MS [J].
Gerber, SA ;
Rush, J ;
Stemman, O ;
Kirschner, MW ;
Gygi, SP .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (12) :6940-6945
[10]   Quantitative analysis of complex protein mixtures using isotope-coded affinity tags [J].
Gygi, SP ;
Rist, B ;
Gerber, SA ;
Turecek, F ;
Gelb, MH ;
Aebersold, R .
NATURE BIOTECHNOLOGY, 1999, 17 (10) :994-999