Synthesis, vibrational Depictions, IRI interpretations and docking research on coordination metal complex Diaqua aspartato zinc (II) monohydrate using DFT approach

被引:16
作者
Dexlin, X. D. Divya [1 ,2 ,4 ]
Tarika, J. D. Deephlin [1 ,2 ,4 ]
Sethuram, M. [3 ]
Beaula, T. Joselin [1 ,2 ,4 ]
机构
[1] Malankara Catholic Coll, Dept Phys, Kaliyakkavilai 629153, Tamil Nadu, India
[2] Malankara Catholic Coll, Res Ctr, Kaliyakkavilai 629153, Tamil Nadu, India
[3] Sethu Inst Technol, Dept Chem Engn, Kariapatti 626115, Tamil Nadu, India
[4] Manonmaniam Sundaranar Univ, Tirunelveli 627012, Tamil Nadu, India
关键词
NCI; IRI; DORI; IR; Docking; ADMET; SPECTROSCOPIC FT-IR; CRYSTAL-STRUCTURES; NBO ANALYSIS; 1,10-PHENANTHROLINE; DERIVATIVES; COPPER(II); PYRIDINE; HARDNESS; NMR;
D O I
10.1016/j.molliq.2022.118687
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
In this study, the anti-viral metal coordination complex Diaqua aspartato zinc (II) Monohydrate (DAZM) was grown and its functional outcomes were depicted using Infrared and Raman spectra. For the computational calculations, the Gaussian software package with the B3LYP functional method was implemented to find the optimised parameters of DAZM and correlated them with the experimental data. With the aid of the SQM method, scaled wavenumbers for all the modes of vibration have been deliberated from the PED results. The donor-acceptor interactions were studied to inspect the molecular stability and bond strength. HOMO, LUMO and ESP analyses were done using DFT, whereas, the absorption band in the UV-vis spectrum was predicted and compared with the experimental data. The interactions obtained in the coordination compound were investigated through NCI, DORI and IRI analyses. The docking parameters were studied with SARS-CoV-2 spike glycoproteins and the minimum binding energy was calculated. With the aid of Lipinski's rule, drug likeness test was done for the DAZM molecule and using the ADMET contour the molecule is suggested as a part of medications. (C) 2022 Elsevier B.V. All rights reserved.
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页数:14
相关论文
共 74 条
[1]   Electronic basis of improper hydrogen bonding: A subtle balance of hyperconjugation and rehybridization [J].
Alabugin, IV ;
Manoharan, M ;
Peabody, S ;
Weinhold, F .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2003, 125 (19) :5973-5987
[2]  
[Anonymous], 2009, The PyMOL Molecular Graphics System 1.1
[3]  
[Anonymous], 1983, METAL IONS BIOL SYST, V1
[4]  
[Anonymous], 1998, NBO Version3.1
[5]  
[Anonymous], 1980, Infrared Characteristic Group Frequencies
[6]   The spectroscopic (FT-IR, FT-Raman), MESP, first order hyperpolarizability, NBO analysis, HOMO and LUMO analysis of 1,5-dimethyl napthalene by density functional method [J].
Arivazhagan, M. ;
Subhasini, V. P. ;
Kavitha, R. ;
Senthilkumar, R. .
SPECTROCHIMICA ACTA PART A-MOLECULAR AND BIOMOLECULAR SPECTROSCOPY, 2014, 131 :636-646
[7]   Synthesis, vibrational, NMR, quantum chemical and structure-activity relation studies of 2-hydroxy-4-methoxyacetophenone [J].
Arjunan, V. ;
Devi, L. ;
Subbalakshmi, R. ;
Rani, T. ;
Mohan, S. .
SPECTROCHIMICA ACTA PART A-MOLECULAR AND BIOMOLECULAR SPECTROSCOPY, 2014, 130 :164-177
[8]   EXCITED-STATES OF POLYENE RADICAL CATIONS - LIMITATIONS OF KOOPMANS THEOREM [J].
BALLY, T ;
NITSCHE, S ;
ROTH, K ;
HASELBACH, E .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1984, 106 (14) :3927-3933
[9]   Biological and and spectral studies of O-Tolyl Biguanide: Experimental and theoretical approach [J].
Beaula, T. Joselin ;
Muthuraja, P. ;
Sethuram, M. ;
Dhandapani, M. ;
Rastogi, V. K. ;
Jothy, V. Bena .
JOURNAL OF MOLECULAR STRUCTURE, 2017, 1128 :290-299
[10]   Biological applications and spectroscopic investigations of 4-nitrophenol-urea dimer: A DFT approach [J].
Beaula, T. Joselin ;
Muthuraja, P. ;
Dhandapani, M. ;
Joe, I. Hubert ;
Rastogi, V. K. ;
Jothy, V. Bena .
CHEMICAL PHYSICS LETTERS, 2016, 645 :59-70