A novel SR-related protein is required for the second step of pre-mRNA splicing

被引:57
作者
Cazalla, D [1 ]
Newton, K [1 ]
Cáceres, JF [1 ]
机构
[1] Western Gen Hosp, MRC Human Genet Unit, Edinburgh EH4 2XU, Midlothian, Scotland
基金
英国医学研究理事会;
关键词
D O I
10.1128/MCB.25.8.2969-2980.2005
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The SR family proteins and SR-related polypeptides are important regulators of pre-mRNA splicing. A novel SR-related protein of an apparent molecular mass of 53 kDa was isolated in a gene trap screen that identifies proteins which localize to the nuclear speckles. This novel protein possesses an arginine- and serine-rich domain and was termed SRrp53 (for SR-related protein of 53 kDa). In support for a role of this novel RS-containing protein in pre-mRNA splicing, we identified the mouse ortholog of the Saccharomyces cerevisiae U1 snRNP-specific protein Luc7p and the U2AF(65)-related factor HCC1 as interacting proteins. In addition, SRrp53 is able to interact with some members of the SR family of proteins and with U2AF(35) in a yeast two-hybrid system and in cell extracts. We show that in HeLa nuclear extracts immunodepleted of SRrp53, the second step of pre-mRNA splicing is blocked, and recombinant SRrp53 is able to restore splicing activity. SRrp53 also regulates alternative splicing in a concentration-dependent manner. Taken together, these results suggest that SRrp53 is a novel SR-related protein that has a role both in constitutive and in alternative splicing.
引用
收藏
页码:2969 / 2980
页数:12
相关论文
共 76 条
[1]   InterPro - an integrated documentation resource for protein families, domains and functional sites [J].
Apweiler, R ;
Attwood, TK ;
Bairoch, A ;
Bateman, A ;
Birney, E ;
Biswas, M ;
Bucher, P ;
Cerutti, L ;
Corpet, F ;
Croning, MDR ;
Durbin, R ;
Falquet, L ;
Fleischmann, W ;
Gouzy, J ;
Hermjakob, H ;
Hulo, N ;
Jonassen, I ;
Kahn, D ;
Kanapin, A ;
Karavidopoulou, Y ;
Lopez, R ;
Marx, B ;
Mulder, NJ ;
Oinn, TM ;
Pagni, M ;
Servant, F ;
Sigrist, CJA ;
Zdobnov, EM .
BIOINFORMATICS, 2000, 16 (12) :1145-1150
[2]   Identification and characterization of a novel serine-arginine-rich splicing regulatory protein [J].
Barnard, DC ;
Patton, JG .
MOLECULAR AND CELLULAR BIOLOGY, 2000, 20 (09) :3049-3057
[3]   Regulation of alternative splicing by SRrp86 through coactivation and repression of specific SR proteins [J].
Barnard, DC ;
Li, J ;
Peng, R ;
Patton, JG .
RNA, 2002, 8 (04) :526-533
[4]  
Ben Yehuda S, 1998, RNA, V4, P1304
[5]   SR-related proteins and the processing of messenger RNA precursors [J].
Blencowe, BJ ;
Bowman, JAL ;
McCracken, S ;
Rosonina, E .
BIOCHEMISTRY AND CELL BIOLOGY, 1999, 77 (04) :277-291
[6]   Exonic splicing enhancers: mechanism of action, diversity and role in human genetic diseases [J].
Blencowe, BJ .
TRENDS IN BIOCHEMICAL SCIENCES, 2000, 25 (03) :106-110
[7]   A coactivator of pre-mRNA splicing [J].
Blencowe, BJ ;
Issner, R ;
Nickerson, JA ;
Sharp, PA .
GENES & DEVELOPMENT, 1998, 12 (07) :996-1009
[8]  
Boucher L, 2001, RNA, V7, P1693
[9]  
Bourgeois CF, 1999, MOL CELL BIOL, V19, P7347
[10]   REGULATION OF ALTERNATIVE SPLICING IN-VIVO BY OVEREXPRESSION OF ANTAGONISTIC SPLICING FACTORS [J].
CACERES, JF ;
STAMM, S ;
HELFMAN, DM ;
KRAINER, AR .
SCIENCE, 1994, 265 (5179) :1706-1709