Transient Protein-Protein Interactions: Structural, Functional, and Network Properties

被引:394
作者
Perkins, James R. [1 ]
Diboun, Ilhem [1 ]
Dessailly, Benoit H. [1 ]
Lees, Jon G. [1 ]
Orengo, Christine [1 ]
机构
[1] UCL, Dept Struct & Mol Biol, London WC1E 6BT, England
关键词
BIMOLECULAR FLUORESCENCE COMPLEMENTATION; LINEAR MOTIFS; INTRINSIC DISORDER; DATA INTEGRATION; CROSS-LINKING; HUB PROTEINS; COMPLEX; BINDING; PREDICTION; EVOLUTION;
D O I
10.1016/j.str.2010.08.007
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Transient interactions, which involve protein interactions that are formed and broken easily, are important in many aspects of cellular function. Here we describe structural and functional properties of transient interactions between globular domains and between globular domains, short peptides, and disordered regions. The importance of posttranslational modifications in transient interactions is also considered. We review techniques used in the detection of the different types of transient protein-protein interactions. We also look at the role of transient interactions within protein-protein interaction networks and consider their contribution to different aspects of these networks.
引用
收藏
页码:1233 / 1243
页数:11
相关论文
共 91 条
[1]   Mining for coexpression across hundreds of datasets using novel rank aggregation and visualization methods [J].
Adler, Priit ;
Kolde, Raivo ;
Kull, Meelis ;
Tkachenko, Aleksandr ;
Peterson, Hedi ;
Reimand, Jueri ;
Vilo, Jaak .
GENOME BIOLOGY, 2009, 10 (12)
[2]   Statistical analysis of predominantly transient protein-protein interfaces [J].
Ansari, S ;
Helms, V .
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2005, 61 (02) :344-355
[3]   Physicochemical descriptors to discriminate protein-protein interactions in permanent and transient complexes selected by means of machine learning algorithms [J].
Block, Peter ;
Paern, Juri ;
Huellermeier, Eyke ;
Sanschagrin, Paul ;
Sotriffer, Christoph A. ;
Klebe, Gerhard .
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2006, 65 (03) :607-622
[4]   Regulation of p53-insights into a complex process [J].
Boehme, Karen A. ;
Blattner, Christine .
CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY, 2009, 44 (06) :367-392
[5]   The role of residue stability in transient protein-protein interactions involved in enzymatic phosphate hydrolysis.: A computational study [J].
Bonet, J ;
Caltabiano, G ;
Khan, AK ;
Johnston, MA ;
Corbí, C ;
Gómez, A ;
Rovira, X ;
Teyra, J ;
Villà-Freixa, J .
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2006, 63 (01) :65-77
[6]   NMR analysis of protein interactions [J].
Bonvin, AMJJ ;
Boelens, R ;
Kaptein, R .
CURRENT OPINION IN CHEMICAL BIOLOGY, 2005, 9 (05) :501-508
[7]  
Braun P, 2009, NAT METHODS, V6, P91, DOI [10.1038/NMETH.1281, 10.1038/nmeth.1281]
[8]   Target selection for complex structural gemomics [J].
Bravo, Jeronimo ;
Aloy, Patrick .
CURRENT OPINION IN STRUCTURAL BIOLOGY, 2006, 16 (03) :385-392
[9]   The p53-Mdm2-HAUSP complex is involved in p53 stabilization by HAUSP [J].
Brooks, C. L. ;
Li, M. ;
Hu, M. ;
Shi, Y. ;
Gu, W. .
ONCOGENE, 2007, 26 (51) :7262-7266
[10]   Online predicted human interaction database [J].
Brown, KR ;
Jurisica, I .
BIOINFORMATICS, 2005, 21 (09) :2076-2082