Conformational control through co-operative nonconventional C-H• • •N hydrogen bonds

被引:2
|
作者
Bosch, Eric [1 ]
Bowling, Nathan P. [2 ]
Oburn, Shalisa M. [1 ]
机构
[1] Missouri State Univ, Chem Dept, 901 South Natl Ave, Springfield, MO 65897 USA
[2] Univ Wisconsin, Dept Chem, 2001 Fourth Ave, Stevens Point, WI 54481 USA
基金
美国国家科学基金会;
关键词
crystal structure; C-H center dot center dot center dot N hydrogen bond; intramolecular hydrogen bonding; nonconventional hydrogen bond; conformational control; molecular rhombus; self-complementary hydrogen bond;
D O I
10.1107/S2053229621007427
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
We report the design, synthesis, and crystal structure of a conjugated aryleneethynyl molecule, 2-(2-{4,5-dimethoxy-2-[2-(2,3,4-trifluorophenyl)ethynyl]phenyl}ethynyl)-6-[2-(pyridin-2-yl)-ethynyl]pyridine, C30H17F3N2O2, that adopts a planar rhombus conformation in the solid state. The molecule crystallizes in the space group P (1) over bar, with Z = 2, and features two intramolecular sp(2)-C-H center dot center dot center dot N hydrogen bonds that co-operatively hold the arylethynyl molecule in a rhombus conformation. The H atoms are activated towards hydrogen bonding since they are situated on a trifluorophenyl ring and the H center dot center dot center dot N distances are 2.470 (16) and 2.646 (16) angstrom, with C-H center dot center dot center dot N angles of 161.7 (2) and 164.7 (2)degrees, respectively. Molecular electrostatic potential calculations support the formation of C-H center dot center dot center dot N hydrogen bonds to the trifluorophenyl moiety. Hirshfeld surface analysis identifies a self-complementary C-H center dot center dot center dot O dimeric interaction between adjacent 1,2-dimethoxybenzene segments that is shown to be common in structures containing that moiety.
引用
收藏
页码:485 / +
页数:11
相关论文
共 50 条
  • [41] Weak hydrogen bonds C-H•••S and C-H•••F-C in the thiirane-trifluoromethane dimer
    Cocinero, EJ
    Sánchez, R
    Blanco, S
    Lesarri, A
    López, JC
    Alonso, JL
    CHEMICAL PHYSICS LETTERS, 2005, 402 (1-3) : 4 - 10
  • [42] Weak C-H•••O and C-H•••F-C hydrogen bonds in the oxirane-trifluoromethane dimer
    Alonso, JL
    Antolínez, S
    Blanco, S
    Lesarri, A
    López, JC
    Caminati, W
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2004, 126 (10) : 3244 - 3249
  • [43] INTRAMOLECULAR INSERTION OF CYCLOPROPYLIDENES INTO N-H BONDS AND INTO C-H BONDS ADJACENT TO NITROGEN
    BAIRD, MS
    KAURA, AC
    JOURNAL OF THE CHEMICAL SOCIETY-CHEMICAL COMMUNICATIONS, 1976, (10) : 356 - 357
  • [44] Sapphyrin supramolecules through C-H•••S and C-H•••Se hydrogen bonds -: First structural characterization of meso-arylsapphyrins bearing heteroatoms
    Narayanan, SJ
    Sridevi, B
    Chandrashekar, TK
    Vij, A
    Roy, R
    ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 1998, 37 (24) : 3394 - 3397
  • [45] Can C-H•••F-C hydrogen bonds alter crystal packing features in the presence of N-H•••O=C hydrogen bond?
    Yadav, Hare Ram
    Choudhury, Angshuman Roy
    JOURNAL OF MOLECULAR STRUCTURE, 2017, 1150 : 469 - 480
  • [46] 5-Amino-1-benzoyl-3-methylpyrazole: complex sheets built from N-H•••N, C-H•••O and C-H•••π(arene) hydrogen bonds
    Quiroga, Jairo
    Portilla, Jaime
    Hursthouse, Michael B.
    Cobo, Justo
    Glidewell, Christopher
    ACTA CRYSTALLOGRAPHICA SECTION C-STRUCTURAL CHEMISTRY, 2010, 66 : O159 - O162
  • [47] Three crystallographic criteria for the existence of intermolecular hydrogen bonds:: II.: The C-H•••X hydrogen bonds (X = O, N, and Cl)
    Zefirov, YV
    CRYSTALLOGRAPHY REPORTS, 1998, 43 (02) : 283 - 287
  • [48] A search for C-H•••O type hydrogen bonds in Lamivudine (3TC).: An exploratory conformational and electronic analysis
    Fidanza, NG
    Suvire, FD
    Sosa, GL
    Lobayan, RM
    Enriz, RD
    Peruchena, NM
    JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM, 2001, 543 : 185 - 193
  • [49] Tuning hydrogen atom abstraction from the aliphatic C-H bonds of basic substrates by protonation. Control over selectivity by C-H deactivation
    Salamone, Michela
    Giammarioli, Ilaria
    Bietti, Massimo
    CHEMICAL SCIENCE, 2013, 4 (08) : 3255 - 3262
  • [50] Dynamic Approach to Synthetic Lectin for Glucose with Boosted Binding Affinity through C-H Hydrogen Bonds
    Zhai, Canjia
    Xu, Chengkai
    Cui, Yunpeng
    Wojtas, Lukasz
    Liu, Wenqi
    CHEMISTRY-A EUROPEAN JOURNAL, 2023, 29 (32)