Melanocytes determine angiogenesis gene expression across human tissues

被引:4
作者
Freilikhman, Shirly [1 ]
Halasi, Marianna [2 ]
Eran, Alal [1 ,3 ]
Adini, Irit [2 ]
机构
[1] Ben Gurion Univ Negev, Dept Life Sci, Beer Sheva, Israel
[2] Harvard Med Sch, Massachusetts Gen Hosp, Dept Surg, Ctr Engn Med, Boston, MA 02115 USA
[3] Boston Childrens Hosp, Computat Hlth Informat Program, Boston, MA 02115 USA
来源
PLOS ONE | 2021年 / 16卷 / 05期
基金
美国国家卫生研究院;
关键词
MACULAR DEGENERATION; RACIAL-DIFFERENCES; GENOME-WIDE; PIGMENTATION; CARE;
D O I
10.1371/journal.pone.0251121
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Several angiogenesis-dependent diseases, including age-related macular degeneration and infantile hemangioma, display differential prevalence among Black, as compared to White individuals. Although socioeconomic status and genetic architecture have been suggested as explaining these differences, we have recently shown that pigment production per se might be involved. For example, we have shown that the extracellular protein fibromodulin is a pro-angiogenic factor highly secreted by melanocytes in White but not Black individuals. Still, additional pigment-dependent angiogenic factors and their molecular mechanisms remain to be identified. Understanding the contribution of pigmentation to angiogenesis in health and disease is essential for precision medicine of angiogenesis-dependent diseases with racial disparity. Toward that goal, we compared the transcriptomes of Black and White individuals in three tissues with angiogenic activity, namely artery, whole blood, and skin. We identified several differentially expressed angiogenesis pathways, including artery morphogenesis, regulation of endothelial cell chemotaxis, and cellular response to vascular endothelial growth factor stimulus. We then demonstrated that the expression of key genes in these pathways is directly modulated by the degree of pigmentation. We further identified the precise pigment production pathway controlling the expression of these genes, namely melanocortin 1 receptor (MC1R) signaling. These results demonstrate pigment-mediated regulation of angiogenesis-related pathways and their driver genes across human tissues.
引用
收藏
页数:14
相关论文
共 37 条
  • [1] Melanocyte pigmentation inversely correlates with MCP-1 production and angiogenesis-inducing potential
    Adini, Irit
    Adini, Avner
    Bazinet, Lauren
    Watnick, Randolph S.
    Bielenberg, Diane R.
    D'Amato, Robert J.
    [J]. FASEB JOURNAL, 2015, 29 (02) : 662 - 670
  • [2] Melanocyte-secreted fibromodulin promotes an angiogenic microenvironment
    Adini, Irit
    Ghosh, Kaustabh
    Adini, Avner
    Chi, Zai-Long
    Yoshimura, Takeru
    Benny, Ofra
    Connor, Kip M.
    Rogers, Michael S.
    Bazinet, Lauren
    Birsner, Amy E.
    Bielenberg, Diane R.
    D'Amato, Robert J.
    [J]. JOURNAL OF CLINICAL INVESTIGATION, 2014, 124 (01) : 425 - 436
  • [3] Al-Dabagh A., 2014, DERMATOL ONLINE J, V20
  • [4] Diverging Racial Trends in Neonatal Infantile Hemangioma Diagnoses, 1979-2006
    Amrock, Stephen M.
    Weitzman, Michael
    [J]. PEDIATRIC DERMATOLOGY, 2013, 30 (04) : 493 - 494
  • [5] HTSeq-a Python']Python framework to work with high-throughput sequencing data
    Anders, Simon
    Pyl, Paul Theodor
    Huber, Wolfgang
    [J]. BIOINFORMATICS, 2015, 31 (02) : 166 - 169
  • [6] The Genotype-Tissue Expression (GTEx) pilot analysis: Multitissue gene regulation in humans
    Ardlie, Kristin G.
    DeLuca, David S.
    Segre, Ayellet V.
    Sullivan, Timothy J.
    Young, Taylor R.
    Gelfand, Ellen T.
    Trowbridge, Casandra A.
    Maller, Julian B.
    Tukiainen, Taru
    Lek, Monkol
    Ward, Lucas D.
    Kheradpour, Pouya
    Iriarte, Benjamin
    Meng, Yan
    Palmer, Cameron D.
    Esko, Tonu
    Winckler, Wendy
    Hirschhorn, Joel N.
    Kellis, Manolis
    MacArthur, Daniel G.
    Getz, Gad
    Shabalin, Andrey A.
    Li, Gen
    Zhou, Yi-Hui
    Nobel, Andrew B.
    Rusyn, Ivan
    Wright, Fred A.
    Lappalainen, Tuuli
    Ferreira, Pedro G.
    Ongen, Halit
    Rivas, Manuel A.
    Battle, Alexis
    Mostafavi, Sara
    Monlong, Jean
    Sammeth, Michael
    Mele, Marta
    Reverter, Ferran
    Goldmann, Jakob M.
    Koller, Daphne
    Guigo, Roderic
    McCarthy, Mark I.
    Dermitzakis, Emmanouil T.
    Gamazon, Eric R.
    Im, Hae Kyung
    Konkashbaev, Anuar
    Nicolae, Dan L.
    Cox, Nancy J.
    Flutre, Timothee
    Wen, Xiaoquan
    Stephens, Matthew
    [J]. SCIENCE, 2015, 348 (6235) : 648 - 660
  • [7] HISTOCHEMICAL-OBSERVATIONS ON RODENT BRAIN MELANIN
    BARDEN, H
    LEVINE, S
    [J]. BRAIN RESEARCH BULLETIN, 1983, 10 (06) : 847 - 851
  • [8] CONTROLLING THE FALSE DISCOVERY RATE - A PRACTICAL AND POWERFUL APPROACH TO MULTIPLE TESTING
    BENJAMINI, Y
    HOCHBERG, Y
    [J]. JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY, 1995, 57 (01) : 289 - 300
  • [9] Trimmomatic: a flexible trimmer for Illumina sequence data
    Bolger, Anthony M.
    Lohse, Marc
    Usadel, Bjoern
    [J]. BIOINFORMATICS, 2014, 30 (15) : 2114 - 2120
  • [10] Racial differences in the prevalence of age-related macular degeneration - The Salisbury Eye Evaluation (SEE) Project
    Bressler, Susan B.
    Munoz, Beatriz
    Solomon, Sharon D.
    [J]. ARCHIVES OF OPHTHALMOLOGY, 2008, 126 (02) : 241 - 245