Soil microbiota and microarthropod communities in oil contaminated sites in the European Subarctic

被引:14
作者
Melekhina, E. N. [1 ]
Belykh, E. S. [1 ]
Markarova, M. Yu. [1 ]
Taskaeva, A. A. [1 ]
Rasova, E. E. [1 ]
Baturina, O. A. [2 ]
Kabilov, M. R. [2 ]
Velegzhaninov, I. O. [1 ]
机构
[1] Russian Acad Sci IB FRC Komi SC UB RAS, Komi Sci Ctr, Inst Biol, Kommunist Skaya 28, Syktyvkar 167982, Russia
[2] Russian Acad Sci ICBFM SB RAS, Siberian Branch, Inst Chem Biol & Fundamental Med, Lavrentieva 8, Novosibirsk 630090, Russia
关键词
BACTERIAL COMMUNITY; CATABOLIC GENES; ORIBATID MITES; BIOREMEDIATION; COLLEMBOLA; DIVERSITY; MICROORGANISMS; SUCCESSIONS; BIODEGRADATION; HYDROCARBONS;
D O I
10.1038/s41598-021-98680-8
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The present comprehensive study aimed to estimate the aftermath of oil contamination and the efficacy of removing the upper level of polluted soil under the conditions of the extreme northern taiga of northeastern European Russia. Soil samples from three sites were studied. Two sites were contaminated with the contents of a nearby sludge collector five years prior to sampling. The highly contaminated upper soil level was removed from one of them. The other was left for self-restoration. A chemical analysis of the soils was conducted, and changes in the composition of the soil zoocoenosis and bacterial and fungal microbiota were investigated. At both contaminated sites, a decrease in the abundance and taxonomic diversity of indicator groups of soil fauna, oribatid mites and collembolans compared to the background site were found. The pioneer eurytopic species Oppiella nova, Proisotoma minima and Xenyllodes armatus formed the basis of the microarthropod populations in the contaminated soil. A complete change in the composition of dominant taxonomic units was observed in the microbiota, both the bacterial and fungal communities. There was an increase in the proportion of representatives of Proteobacteria and Actinobacteria in polluted soils compared to the background community. Hydrocarbon-degrading bacteria-Alcanivorax, Rhodanobacter ginsengisoli, Acidobacterium capsulatum, and Acidocella-and fungi-Amorphotheca resinae abundances greatly increased in oil-contaminated soil. Moreover, among both bacteria and fungi, a sharp increase in the abundance of uncultivated organisms that deserve additional attention as potential oil degraders or organisms with a high resistance to oil contamination were observed. The removal of the upper soil level was partly effective in terms of decreasing the oil product concentration (from approximately 21 to 2.6 g/kg of soil) and preventing a decrease in taxonomic richness but did not prevent alterations in the composition of the microbiota or zoocoenosis.
引用
收藏
页数:16
相关论文
共 95 条
[31]   Alcanivorax which prevails in oil-contaminated seawater exhibits broad substrate specificity for alkane degradation [J].
Hara, A ;
Syutsubo, K ;
Harayama, S .
ENVIRONMENTAL MICROBIOLOGY, 2003, 5 (09) :746-753
[32]   Soil food web structure during ecosystem development after land abandonment [J].
Holtkamp, Remko ;
Kardol, Paul ;
van der Wal, Annemieke ;
Dekker, Stefan C. ;
van der Putten, Wim H. ;
de Ruiter, Peter C. .
APPLIED SOIL ECOLOGY, 2008, 39 (01) :23-34
[33]   iNEXT: an R package for rarefaction and extrapolation of species diversity (Hill numbers) [J].
Hsieh, T. C. ;
Ma, K. H. ;
Chao, Anne .
METHODS IN ECOLOGY AND EVOLUTION, 2016, 7 (12) :1451-1456
[34]  
IUSS Working Group WRB, 2015, WORLD SOIL RESOURCES, V106
[35]   Acidocella aromatica sp nov.: an acidophilic heterotrophic alphaproteobacterium with unusual phenotypic traits [J].
Jones, Rose M. ;
Hedrich, Sabrina ;
Johnson, D. Barrie .
EXTREMOPHILES, 2013, 17 (05) :841-850
[36]   Metagenomic and functional analyses of the consequences of reduction of bacterial diversity on soil functions and bioremediation in diesel-contaminated microcosms [J].
Jung, Jaejoon ;
Philippot, Laurent ;
Park, Woojun .
SCIENTIFIC REPORTS, 2016, 6
[37]   Collembola of the genus Protaphorura Absolon, 1901 (Onychiuridae) in the Eastern Palearctic: morphology, distribution, identification key [J].
Kaprus, Igor ;
Weiner, Wanda ;
Pasnik, Grzegorz .
ZOOKEYS, 2016, (620) :119-150
[38]   Identification of metal-responsive oribatid mites in a comparative survey of polluted soils [J].
Khalil, Mohamed A. ;
Janssens, Thierry K. S. ;
Berg, Matty P. ;
van Straalen, Nico M. .
PEDOBIOLOGIA, 2009, 52 (03) :207-221
[39]   The Ecology of Acidobacteria: Moving beyond Genes and Genomes [J].
Kielak, Anna M. ;
Barreto, Cristine C. ;
Kowalchuk, George A. ;
van Veen, Johannes A. ;
Kuramae, Eiko E. .
FRONTIERS IN MICROBIOLOGY, 2016, 7
[40]  
Kireeva N. A., 1994, MICROBIOLOGICAL PROC