Deep learning fully convolution network for lumen characterization in diabetic patients using carotid ultrasound: a tool for stroke risk

被引:57
作者
Biswas, Mainak [1 ]
Kuppili, Venkatanareshbabu [1 ]
Saba, Luca [2 ]
Edla, Damodar Reddy [1 ]
Suri, Harman S. [3 ,4 ]
Sharma, Aditya [5 ]
Cuadrado-Godia, Elisa [6 ]
Laird, John R. [7 ]
Nicolaides, Andrew [8 ,9 ]
Suri, Jasjit S. [4 ]
机构
[1] NIT Goa, Dept Comp Sci & Engn, Ponda, India
[2] AOU Cagliari, Dept Radiol, Cagliari, Italy
[3] Brown Univ, Providence, RI 02912 USA
[4] AtheroPoint, Monitoring & Diagnost Div, Roseville, CA 95661 USA
[5] Univ Virginia, Div Cardiovasc, Charlottesville, VA USA
[6] IMIM Hosp Mar, Dept Neurol, Passeig Maritim 25-29, Barcelona, Spain
[7] Helena Hosp, St Helena, CA USA
[8] Vasc Screening & Diagnost Ctr, London, England
[9] Univ Cyprus, Dept Biol Sci, Nicosia, Cyprus
关键词
Stroke; Ultrasound; Carotid; Lumen diameter; Deep learning; CNN; Performance; INTIMA-MEDIA THICKNESS; WALL THICKNESS; MYOCARDIAL-INFARCTION; ARTERY; SEGMENTATION; DIAMETER; STENOSIS; IMAGES; PLAQUE; ATHEROSCLEROSIS;
D O I
10.1007/s11517-018-1897-x
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
Manual ultrasound (US)-based methods are adapted for lumen diameter (LD) measurement to estimate the risk of stroke but they are tedious, error prone, and subjective causing variability. We propose an automated deep learning (DL)-based system for lumen detection. The system consists of a combination of two DL systems: encoder and decoder for lumen segmentation. The encoder employs a 13-layer convolution neural network model (CNN) for rich feature extraction. The decoder employs three up-sample layers of fully convolution network (FCN) for lumen segmentation. Three sets of manual tracings were used during the training paradigm leading to the design of three DL systems. Cross-validation protocol was implemented for all three DL systems. Using the polyline distance metric, the precision of merit for three DL systems over 407 US scans was 99.61%, 97.75%, and 99.89%, respectively. The Jaccard index and Dice similarity of DL lumen segmented region against three ground truth (GT) regions were 0.94, 0.94, and 0.93 and 0.97, 0.97, and 0.97, respectively. The corresponding AUC for three DL systems was 0.95, 0.91, and 0.93. The experimental results demonstrated superior performance of proposed deep learning system over conventional methods in literature.
引用
收藏
页码:543 / 564
页数:22
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