共 12 条
How microRNAs choose their targets
被引:41
作者:

Hofacker, Ivo L.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Vienna, Inst Theoret Chem, A-1090 Vienna, Austria Univ Vienna, Inst Theoret Chem, A-1090 Vienna, Austria
机构:
[1] Univ Vienna, Inst Theoret Chem, A-1090 Vienna, Austria
关键词:
D O I:
10.1038/ng1007-1191
中图分类号:
Q3 [遗传学];
学科分类号:
071007 ;
090102 ;
摘要:
The growing list of known microRNAs is only as useful as our ability to identify the mRNA targets they control. A new study stresses the role of messenger RNA structure in microRNA target recognition and suggests that binding of the RNA-induced silencing complex is largely controlled by the thermodynamics of RNA-RNA interactions.
引用
收藏
页码:1191 / 1192
页数:3
相关论文
共 12 条
[1]
Identification of hundreds of conserved and nonconserved human microRNAs
[J].
Bentwich, I
;
Avniel, A
;
Karov, Y
;
Aharonov, R
;
Gilad, S
;
Barad, O
;
Barzilai, A
;
Einat, P
;
Einav, U
;
Meiri, E
;
Sharon, E
;
Spector, Y
;
Bentwich, Z
.
NATURE GENETICS,
2005, 37 (07)
:766-770

Bentwich, I
论文数: 0 引用数: 0
h-index: 0
机构:
Rosetta Genom, IL-76706 Rehovot, Israel Rosetta Genom, IL-76706 Rehovot, Israel

Avniel, A
论文数: 0 引用数: 0
h-index: 0
机构:
Rosetta Genom, IL-76706 Rehovot, Israel Rosetta Genom, IL-76706 Rehovot, Israel

Karov, Y
论文数: 0 引用数: 0
h-index: 0
机构:
Rosetta Genom, IL-76706 Rehovot, Israel Rosetta Genom, IL-76706 Rehovot, Israel

Aharonov, R
论文数: 0 引用数: 0
h-index: 0
机构:
Rosetta Genom, IL-76706 Rehovot, Israel Rosetta Genom, IL-76706 Rehovot, Israel

Gilad, S
论文数: 0 引用数: 0
h-index: 0
机构:
Rosetta Genom, IL-76706 Rehovot, Israel Rosetta Genom, IL-76706 Rehovot, Israel

Barad, O
论文数: 0 引用数: 0
h-index: 0
机构:
Rosetta Genom, IL-76706 Rehovot, Israel Rosetta Genom, IL-76706 Rehovot, Israel

Barzilai, A
论文数: 0 引用数: 0
h-index: 0
机构:
Rosetta Genom, IL-76706 Rehovot, Israel Rosetta Genom, IL-76706 Rehovot, Israel

Einat, P
论文数: 0 引用数: 0
h-index: 0
机构:
Rosetta Genom, IL-76706 Rehovot, Israel Rosetta Genom, IL-76706 Rehovot, Israel

Einav, U
论文数: 0 引用数: 0
h-index: 0
机构:
Rosetta Genom, IL-76706 Rehovot, Israel Rosetta Genom, IL-76706 Rehovot, Israel

Meiri, E
论文数: 0 引用数: 0
h-index: 0
机构:
Rosetta Genom, IL-76706 Rehovot, Israel Rosetta Genom, IL-76706 Rehovot, Israel

Sharon, E
论文数: 0 引用数: 0
h-index: 0
机构:
Rosetta Genom, IL-76706 Rehovot, Israel Rosetta Genom, IL-76706 Rehovot, Israel

Spector, Y
论文数: 0 引用数: 0
h-index: 0
机构:
Rosetta Genom, IL-76706 Rehovot, Israel Rosetta Genom, IL-76706 Rehovot, Israel

Bentwich, Z
论文数: 0 引用数: 0
h-index: 0
机构:
Rosetta Genom, IL-76706 Rehovot, Israel Rosetta Genom, IL-76706 Rehovot, Israel
[2]
Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis
[J].
Berezikov, Eugene
;
van Tetering, Geert
;
Verheul, Mark
;
van de Belt, Jose
;
van Laake, Linda
;
Vos, Joost
;
Verloop, Robert
;
van de Wetering, Marc
;
Guryev, Victor
;
Takada, Shuji
;
van Zonneveld, Anton Jan
;
Mano, Hiroyuki
;
Plasterk, Ronald
;
Cuppen, Edwin
.
GENOME RESEARCH,
2006, 16 (10)
:1289-1298

Berezikov, Eugene
论文数: 0 引用数: 0
h-index: 0
机构: Hubrecht Lab, NL-3584 CT Utrecht, Netherlands

van Tetering, Geert
论文数: 0 引用数: 0
h-index: 0
机构: Hubrecht Lab, NL-3584 CT Utrecht, Netherlands

Verheul, Mark
论文数: 0 引用数: 0
h-index: 0
机构: Hubrecht Lab, NL-3584 CT Utrecht, Netherlands

van de Belt, Jose
论文数: 0 引用数: 0
h-index: 0
机构: Hubrecht Lab, NL-3584 CT Utrecht, Netherlands

van Laake, Linda
论文数: 0 引用数: 0
h-index: 0
机构: Hubrecht Lab, NL-3584 CT Utrecht, Netherlands

Vos, Joost
论文数: 0 引用数: 0
h-index: 0
机构: Hubrecht Lab, NL-3584 CT Utrecht, Netherlands

Verloop, Robert
论文数: 0 引用数: 0
h-index: 0
机构: Hubrecht Lab, NL-3584 CT Utrecht, Netherlands

van de Wetering, Marc
论文数: 0 引用数: 0
h-index: 0
机构: Hubrecht Lab, NL-3584 CT Utrecht, Netherlands

Guryev, Victor
论文数: 0 引用数: 0
h-index: 0
机构: Hubrecht Lab, NL-3584 CT Utrecht, Netherlands

Takada, Shuji
论文数: 0 引用数: 0
h-index: 0
机构: Hubrecht Lab, NL-3584 CT Utrecht, Netherlands

van Zonneveld, Anton Jan
论文数: 0 引用数: 0
h-index: 0
机构: Hubrecht Lab, NL-3584 CT Utrecht, Netherlands

Mano, Hiroyuki
论文数: 0 引用数: 0
h-index: 0
机构: Hubrecht Lab, NL-3584 CT Utrecht, Netherlands

Plasterk, Ronald
论文数: 0 引用数: 0
h-index: 0
机构:
Hubrecht Lab, NL-3584 CT Utrecht, Netherlands Hubrecht Lab, NL-3584 CT Utrecht, Netherlands

Cuppen, Edwin
论文数: 0 引用数: 0
h-index: 0
机构: Hubrecht Lab, NL-3584 CT Utrecht, Netherlands
[3]
Statistical prediction of single-stranded regions in RNA secondary structure and application to predicting effective antisense target sites and beyond
[J].
Ding, Y
;
Lawrence, CE
.
NUCLEIC ACIDS RESEARCH,
2001, 29 (05)
:1034-1046

Ding, Y
论文数: 0 引用数: 0
h-index: 0
机构:
New York State Dept Hlth, Wadsworth Ctr Labs & Res, Div Mol Med, Albany, NY 12201 USA New York State Dept Hlth, Wadsworth Ctr Labs & Res, Div Mol Med, Albany, NY 12201 USA

Lawrence, CE
论文数: 0 引用数: 0
h-index: 0
机构:
New York State Dept Hlth, Wadsworth Ctr Labs & Res, Div Mol Med, Albany, NY 12201 USA New York State Dept Hlth, Wadsworth Ctr Labs & Res, Div Mol Med, Albany, NY 12201 USA
[4]
The microRNA Registry
[J].
Griffiths-Jones, S
.
NUCLEIC ACIDS RESEARCH,
2004, 32
:D109-D111

Griffiths-Jones, S
论文数: 0 引用数: 0
h-index: 0
机构:
Wellcome Trust Sanger Inst, Cambridge CB10 9SA, England Wellcome Trust Sanger Inst, Cambridge CB10 9SA, England
[5]
MicroRNA target predictions across seven Drosophila species and comparison to mammalian targets
[J].
Grün, D
;
Wang, YL
;
Langenberger, D
;
Gunsalus, KC
;
Rajewsky, N
.
PLOS COMPUTATIONAL BIOLOGY,
2005, 1 (01)
:51-66

Grün, D
论文数: 0 引用数: 0
h-index: 0
机构:
NYU, Dept Biol, Ctr Comparat Funct Genom, New York, NY 10003 USA NYU, Dept Biol, Ctr Comparat Funct Genom, New York, NY 10003 USA

Wang, YL
论文数: 0 引用数: 0
h-index: 0
机构:
NYU, Dept Biol, Ctr Comparat Funct Genom, New York, NY 10003 USA NYU, Dept Biol, Ctr Comparat Funct Genom, New York, NY 10003 USA

Langenberger, D
论文数: 0 引用数: 0
h-index: 0
机构:
NYU, Dept Biol, Ctr Comparat Funct Genom, New York, NY 10003 USA NYU, Dept Biol, Ctr Comparat Funct Genom, New York, NY 10003 USA

Gunsalus, KC
论文数: 0 引用数: 0
h-index: 0
机构:
NYU, Dept Biol, Ctr Comparat Funct Genom, New York, NY 10003 USA NYU, Dept Biol, Ctr Comparat Funct Genom, New York, NY 10003 USA

Rajewsky, N
论文数: 0 引用数: 0
h-index: 0
机构:
NYU, Dept Biol, Ctr Comparat Funct Genom, New York, NY 10003 USA NYU, Dept Biol, Ctr Comparat Funct Genom, New York, NY 10003 USA
[6]
The role of site accessibility in microRNA target recognition
[J].
Kertesz, Michael
;
Iovino, Nicola
;
Unnerstall, Ulrich
;
Gaul, Ulrike
;
Segal, Eran
.
NATURE GENETICS,
2007, 39 (10)
:1278-1284

Kertesz, Michael
论文数: 0 引用数: 0
h-index: 0
机构: Weizmann Inst Sci, Dept Comp Sci & Appl Math, IL-76100 Rehovot, Israel

Iovino, Nicola
论文数: 0 引用数: 0
h-index: 0
机构: Weizmann Inst Sci, Dept Comp Sci & Appl Math, IL-76100 Rehovot, Israel

Unnerstall, Ulrich
论文数: 0 引用数: 0
h-index: 0
机构: Weizmann Inst Sci, Dept Comp Sci & Appl Math, IL-76100 Rehovot, Israel

Gaul, Ulrike
论文数: 0 引用数: 0
h-index: 0
机构:
Weizmann Inst Sci, Dept Comp Sci & Appl Math, IL-76100 Rehovot, Israel Weizmann Inst Sci, Dept Comp Sci & Appl Math, IL-76100 Rehovot, Israel

论文数: 引用数:
h-index:
机构:
[7]
Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets
[J].
Lewis, BP
;
Burge, CB
;
Bartel, DP
.
CELL,
2005, 120 (01)
:15-20

Lewis, BP
论文数: 0 引用数: 0
h-index: 0
机构: MIT, Dept Biol, Cambridge, MA 02139 USA

Burge, CB
论文数: 0 引用数: 0
h-index: 0
机构: MIT, Dept Biol, Cambridge, MA 02139 USA

Bartel, DP
论文数: 0 引用数: 0
h-index: 0
机构: MIT, Dept Biol, Cambridge, MA 02139 USA
[8]
Potent effect of target structure on microRNA function
[J].
Long, Dang
;
Lee, Rosalind
;
Williams, Peter
;
Chan, Chi Yu
;
Ambros, Victor
;
Ding, Ye
.
NATURE STRUCTURAL & MOLECULAR BIOLOGY,
2007, 14 (04)
:287-294

Long, Dang
论文数: 0 引用数: 0
h-index: 0
机构: New York State Dept Hlth, Wadsworth Ctr, Albany, NY 12208 USA

Lee, Rosalind
论文数: 0 引用数: 0
h-index: 0
机构: New York State Dept Hlth, Wadsworth Ctr, Albany, NY 12208 USA

Williams, Peter
论文数: 0 引用数: 0
h-index: 0
机构: New York State Dept Hlth, Wadsworth Ctr, Albany, NY 12208 USA

Chan, Chi Yu
论文数: 0 引用数: 0
h-index: 0
机构: New York State Dept Hlth, Wadsworth Ctr, Albany, NY 12208 USA

Ambros, Victor
论文数: 0 引用数: 0
h-index: 0
机构: New York State Dept Hlth, Wadsworth Ctr, Albany, NY 12208 USA

Ding, Ye
论文数: 0 引用数: 0
h-index: 0
机构: New York State Dept Hlth, Wadsworth Ctr, Albany, NY 12208 USA
[9]
Thermodynamics of RNA-RNA binding
[J].
Mückstein, U
;
Tafer, H
;
Hackermüller, J
;
Bernhart, SH
;
Stadler, PF
;
Hofacker, IL
.
BIOINFORMATICS,
2006, 22 (10)
:1177-1182

Mückstein, U
论文数: 0 引用数: 0
h-index: 0
机构: Univ Vienna, Inst Theoret Chem, A-1090 Vienna, Austria

Tafer, H
论文数: 0 引用数: 0
h-index: 0
机构: Univ Vienna, Inst Theoret Chem, A-1090 Vienna, Austria

Hackermüller, J
论文数: 0 引用数: 0
h-index: 0
机构: Univ Vienna, Inst Theoret Chem, A-1090 Vienna, Austria

Bernhart, SH
论文数: 0 引用数: 0
h-index: 0
机构: Univ Vienna, Inst Theoret Chem, A-1090 Vienna, Austria

Stadler, PF
论文数: 0 引用数: 0
h-index: 0
机构: Univ Vienna, Inst Theoret Chem, A-1090 Vienna, Austria

Hofacker, IL
论文数: 0 引用数: 0
h-index: 0
机构: Univ Vienna, Inst Theoret Chem, A-1090 Vienna, Austria
[10]
Fast and effective prediction of microRNA/target duplexes
[J].
Rehmsmeier, M
;
Steffen, P
;
Höchsmann, M
;
Giegerich, R
.
RNA,
2004, 10 (10)
:1507-1517

Rehmsmeier, M
论文数: 0 引用数: 0
h-index: 0
机构: Univ Bielefeld, Int NRW Grad Sch Bioinformat & Genome Res, D-33501 Bielefeld, Germany

Steffen, P
论文数: 0 引用数: 0
h-index: 0
机构: Univ Bielefeld, Int NRW Grad Sch Bioinformat & Genome Res, D-33501 Bielefeld, Germany

Höchsmann, M
论文数: 0 引用数: 0
h-index: 0
机构: Univ Bielefeld, Int NRW Grad Sch Bioinformat & Genome Res, D-33501 Bielefeld, Germany

Giegerich, R
论文数: 0 引用数: 0
h-index: 0
机构: Univ Bielefeld, Int NRW Grad Sch Bioinformat & Genome Res, D-33501 Bielefeld, Germany