Biofilms: hot spots of horizontal gene transfer (HGT) in aquatic environments, with a focus on a new HGT mechanism
被引:278
作者:
Abe, Kimihiro
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Univ Tsukuba, Fac Life & Environm Sci, Tsukuba, Ibaraki 3058577, JapanUniv Tsukuba, Fac Life & Environm Sci, Tsukuba, Ibaraki 3058577, Japan
Abe, Kimihiro
[1
]
Nomura, Nobuhiko
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Univ Tsukuba, Fac Life & Environm Sci, Tsukuba, Ibaraki 3058577, Japan
Univ Tsukuba, Microbiol Res Ctr Sustainabil, Tsukuba, Ibaraki 3058577, JapanUniv Tsukuba, Fac Life & Environm Sci, Tsukuba, Ibaraki 3058577, Japan
Nomura, Nobuhiko
[1
,2
]
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Suzuki, Satoru
[3
]
机构:
[1] Univ Tsukuba, Fac Life & Environm Sci, Tsukuba, Ibaraki 3058577, Japan
[2] Univ Tsukuba, Microbiol Res Ctr Sustainabil, Tsukuba, Ibaraki 3058577, Japan
Biofilms in water environments are thought to be hot spots for horizontal gene transfer (HGT) of antibiotic resistance genes (ARGs). ARGs can be spread via HGT, though mechanisms are known and have been shown to depend on the environment, bacterial communities and mobile genetic elements. Classically, HGT mechanisms include conjugation, transformation and transduction; more recently, membrane vesicles (MVs) have been reported as DNA reservoirs implicated in interspecies HGT. Here, we review the current knowledge on the HGT mechanisms with a focus on the role of MVs and the methodological innovations in the HGT research.
机构:
Inst Pasteur, Unite Membranes Bacteriennes, CNRS, URA 2172, F-75724 Paris 15, FranceInst Pasteur, Unite Membranes Bacteriennes, CNRS, URA 2172, F-75724 Paris 15, France
机构:
East China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R ChinaEast China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R China
Guo, Xing-pan
;
Yang, Yi
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机构:
East China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R China
East China Normal Univ, State Key Lab Estuarine & Coastal Res, 3663 North Zhongshan Rd, Shanghai 200062, Peoples R ChinaEast China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R China
Yang, Yi
;
Lu, Da-pei
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机构:
East China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R ChinaEast China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R China
Lu, Da-pei
;
Niu, Zuo-shun
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机构:
East China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R ChinaEast China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R China
Niu, Zuo-shun
;
Feng, Jing-nan
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机构:
East China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R ChinaEast China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R China
Feng, Jing-nan
;
Chen, Yu-ru
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机构:
East China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R ChinaEast China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R China
Chen, Yu-ru
;
Tou, Fei-yun
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机构:
East China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R ChinaEast China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R China
Tou, Fei-yun
;
Garner, Emily
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机构:
Virginia Tech, Charles E Via Jr Dept Civil & Environm Engn, 418 Durham Hall, Blacksburg, VA 24061 USAEast China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R China
Garner, Emily
;
Xu, Jiang
论文数: 0引用数: 0
h-index: 0
机构:
Carnegie Mellon Univ, Dept Civil & Environm Engn, Pittsburgh, PA 15213 USAEast China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R China
Xu, Jiang
;
Liu, Min
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机构:
East China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R ChinaEast China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R China
Liu, Min
;
Hochella, Michael F., Jr.
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机构:
Virginia Tech, Ctr NanoBioEarth, Dept Geosci, Blacksburg, VA 24061 USA
Pacific Northwest Natl Lab, Geosci Grp, Energy & Environm Directorate, Richland, WA 99352 USAEast China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R China
机构:
Inst Pasteur, Unite Membranes Bacteriennes, CNRS, URA 2172, F-75724 Paris 15, FranceInst Pasteur, Unite Membranes Bacteriennes, CNRS, URA 2172, F-75724 Paris 15, France
机构:
East China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R ChinaEast China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R China
Guo, Xing-pan
;
Yang, Yi
论文数: 0引用数: 0
h-index: 0
机构:
East China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R China
East China Normal Univ, State Key Lab Estuarine & Coastal Res, 3663 North Zhongshan Rd, Shanghai 200062, Peoples R ChinaEast China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R China
Yang, Yi
;
Lu, Da-pei
论文数: 0引用数: 0
h-index: 0
机构:
East China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R ChinaEast China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R China
Lu, Da-pei
;
Niu, Zuo-shun
论文数: 0引用数: 0
h-index: 0
机构:
East China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R ChinaEast China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R China
Niu, Zuo-shun
;
Feng, Jing-nan
论文数: 0引用数: 0
h-index: 0
机构:
East China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R ChinaEast China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R China
Feng, Jing-nan
;
Chen, Yu-ru
论文数: 0引用数: 0
h-index: 0
机构:
East China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R ChinaEast China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R China
Chen, Yu-ru
;
Tou, Fei-yun
论文数: 0引用数: 0
h-index: 0
机构:
East China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R ChinaEast China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R China
Tou, Fei-yun
;
Garner, Emily
论文数: 0引用数: 0
h-index: 0
机构:
Virginia Tech, Charles E Via Jr Dept Civil & Environm Engn, 418 Durham Hall, Blacksburg, VA 24061 USAEast China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R China
Garner, Emily
;
Xu, Jiang
论文数: 0引用数: 0
h-index: 0
机构:
Carnegie Mellon Univ, Dept Civil & Environm Engn, Pittsburgh, PA 15213 USAEast China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R China
Xu, Jiang
;
Liu, Min
论文数: 0引用数: 0
h-index: 0
机构:
East China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R ChinaEast China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R China
Liu, Min
;
Hochella, Michael F., Jr.
论文数: 0引用数: 0
h-index: 0
机构:
Virginia Tech, Ctr NanoBioEarth, Dept Geosci, Blacksburg, VA 24061 USA
Pacific Northwest Natl Lab, Geosci Grp, Energy & Environm Directorate, Richland, WA 99352 USAEast China Normal Univ, Sch Geog Sci, Minist Educ, Key Lab Geog Informat Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R China